RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TMEM127O75204 238 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 IGLV1-40P01703 118 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 TFAP2AP05549 437 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 RRASP10301 218 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 PPIFP30405 207 aaKnown RBP8.97□□□□□ -0.97
CCM2-213ENST00000480658 OR3A3P47888 321 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 SCAND1P57086 179 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 RAB25P57735 213 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 PITPNAQ00169 270 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 FHL3Q13643 280 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 RTL8BQ17RB0 113 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 FAM131AQ6UXB0 335 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 Q6ZS49 121 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 LCNL1Q6ZST4 164 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 TPRA1Q86W33 373 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 OR10R2Q8NGX6 335 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 RAX2Q96IS3 184 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 ADTRPQ96IZ2 230 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 TOLLIPQ9H0E2 274 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 RDH8Q9NYR8 311 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 GAB2Q9UQC2 676 aa8.97□□□□□ -0.97
CCM2-213ENST00000480658 FOXA2Q9Y261 457 aaPredicted RBP8.97□□□□□ -0.97
CCM2-213ENST00000480658 A0A0A6YYD4 124 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 IGHV7-81A0A0B4J1V7 117 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 H3BUA1 57 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 LDLRAD4O15165 306 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 ATP6V0E1O15342 81 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 FABP7O15540 132 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 SLC22A5O76082 557 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 CTXN2P0C2S0 81 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 CT45A6P0DMU7 189 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 CT45A5P0DMU8 189 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 CT45A7P0DMV0 189 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 FGF9P31371 208 aaPredicted RBP8.96□□□□□ -0.98
CCM2-213ENST00000480658 LGALS7P47929 136 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 ZNF616Q08AN1 781 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 AKIRIN2Q53H80 203 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 UBE2UQ5VVX9 321 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 ZNF562Q6V9R5 426 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 MINDY2Q8NBR6 621 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 ABHD5Q8WTS1 349 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 FLYWCH2Q96CP2 140 aaKnown RBP8.96□□□□□ -0.98
CCM2-213ENST00000480658 GINS4Q9BRT9 223 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 CABLES2Q9BTV7 478 aa8.96□□□□□ -0.98
CCM2-213ENST00000480658 C11orf54Q9H0W9 315 aaPredicted RBP8.96□□□□□ -0.98
CCM2-213ENST00000480658 PRKDCP78527 4128 aaKnown RBP8.95□□□□□ -0.98
CCM2-213ENST00000480658 TMEM272A0A1B0GTI8 110 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 LINC01548A6NM66 108 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 PRB2P02812 416 aaPredicted RBP8.95□□□□□ -0.98
CCM2-213ENST00000480658 FCGR3AP08637 254 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 HIST1H1DP16402 221 aaKnown RBP8.95□□□□□ -0.98
CCM2-213ENST00000480658 DTYMKP23919 212 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 MAP2K4P45985 399 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 RAB9AP51151 201 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 TMEM50BP56557 158 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 CD69Q07108 199 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 MOGAT2Q3SYC2 334 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 RPL39P5Q59GN2 51 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 HES5Q5TA89 166 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 FAM53AQ6NSI3 398 aaPredicted RBP8.95□□□□□ -0.98
CCM2-213ENST00000480658 ZNF429Q86V71 674 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 OR11H1Q8NG94 326 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 GFI1Q99684 422 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 DCSTAMPQ9H295 470 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.95□□□□□ -0.981e-6■■■■□ 24.6
CCM2-213ENST00000480658 METTL1Q9UBP6 276 aaKnown RBP8.95□□□□□ -0.98
CCM2-213ENST00000480658 STUB1Q9UNE7 303 aa8.95□□□□□ -0.98
CCM2-213ENST00000480658 RBM7Q9Y580 266 aaKnown RBP8.95□□□□□ -0.98
CCM2-213ENST00000480658 TRBV6-7A0A0A0MS04 114 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 A0A0G2JLM5 398 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 A0A1W2PN81 502 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 NOTOA8MTQ0 251 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 SEC14L6B5MCN3 397 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 MFNGO00587 321 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 ATP6V1G2O95670 118 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 SCTP09683 121 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 NHLRC4P0CG21 123 aaPredicted RBP8.94□□□□□ -0.98
CCM2-213ENST00000480658 CHRNA7P36544 502 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 CLDN12P56749 244 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 RPS16P62249 146 aaKnown RBP8.94□□□□□ -0.98
CCM2-213ENST00000480658 CX3CL1P78423 397 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 ARFRP1Q13795 201 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 ECSCRQ19T08 205 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 ACTBL2Q562R1 376 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 DEFB121Q5J5C9 76 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 PLAC9Q5JTB6 97 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 ZNF491Q8N8L2 437 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 OR1N2Q8NGR9 330 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 ABHD14BQ96IU4 210 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 B9D2Q9BPU9 175 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 OR2D2Q9H210 308 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 KCNK15Q9H427 330 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 OR1A1Q9P1Q5 309 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 SSR3Q9UNL2 185 aa8.94□□□□□ -0.98
CCM2-213ENST00000480658 A0A0A6YYH2 397 aa8.93□□□□□ -0.98
CCM2-213ENST00000480658 A6NJ64 397 aa8.93□□□□□ -0.98
CCM2-213ENST00000480658 I3L521 148 aa8.93□□□□□ -0.98
CCM2-213ENST00000480658 K7EIL1 84 aa8.93□□□□□ -0.98
CCM2-213ENST00000480658 BET1O15155 118 aa8.93□□□□□ -0.98
CCM2-213ENST00000480658 LGALS1P09382 135 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms