RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 TXNDC17Q9BRA2 123 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 C19orf25Q9UFG5 118 aaPredicted RBP11.45□□□□□ -0.58
C9orf78-205ENST00000480023 WIPI2Q9Y4P8 454 aa11.45□□□□□ -0.58
C9orf78-205ENST00000480023 TRAV24A0A0B4J272 114 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 GRIFINA4D1Z8 144 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 GJE1A6NN92 205 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 ZNF716A6NP11 495 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 RBFOX2O43251 390 aaKnown RBP eCLIP11.44□□□□□ -0.58
C9orf78-205ENST00000480023 MMP23AO75900 390 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 SERF1AO75920 110 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 CDC34P49427 236 aaPredicted RBP11.44□□□□□ -0.58
C9orf78-205ENST00000480023 GPM6AP51674 278 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 Q0VG73 95 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 HYAL1Q12794 435 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 TRIP6Q15654 476 aaKnown RBP11.44□□□□□ -0.58
C9orf78-205ENST00000480023 FGFRL1Q8N441 504 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 SLC35E1Q96K37 410 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 DNAJC4Q9NNZ3 241 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 OR1A1Q9P1Q5 309 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 MDFIC2A0A1B0GVS7 189 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 TIAF1O95411 115 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 P0C879 139 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 CRISP2P16562 243 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 CTRLP40313 264 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 ZNF114Q8NC26 417 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 VN1R17PQ8TDU5 208 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 PROK2Q9HC23 129 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 SLC45A2Q9UMX9 530 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 PPP1R3CQ9UQK1 317 aa11.44□□□□□ -0.58
C9orf78-205ENST00000480023 C17orf112F2Z3M2 114 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 NDUFB4O95168 129 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 CHRNB4P30926 498 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 NXPH1P58417 271 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 PMP22Q01453 160 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 TFF3Q07654 80 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 CEACAM16Q2WEN9 425 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 Q6ZS52 159 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 MOB1BQ7L9L4 216 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 C11orf42Q8N5U0 333 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 ZNF709Q8N972 641 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 OR10P1Q8NGE3 313 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 OR1L1Q8NH94 360 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 RDH5Q92781 318 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 DERL1Q9BUN8 251 aa11.43□□□□□ -0.58
C9orf78-205ENST00000480023 PATZ1Q9HBE1 687 aaKnown RBP11.43□□□□□ -0.58
C9orf78-205ENST00000480023 TRBV20OR9-2A0A075B6H5 130 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 RNF212BA8MTL3 300 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 CYC1P08574 325 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 TDGF1P13385 188 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 KITLGP21583 273 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 TIMP3P35625 211 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 ATP5G3P48201 142 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 NRN1LQ496H8 165 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 AAED1Q7RTV5 226 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 Q8N7P7 452 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 Q8N976 141 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 CPEB3Q8NE35 698 aaKnown RBP11.42□□□□□ -0.58
C9orf78-205ENST00000480023 OR5A2Q8NGI9 324 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 RNF2Q99496 336 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 CRIM1Q9NZV1 1036 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 CLEC1BQ9P126 229 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 ZNF407Q9C0G0 2248 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 TCF21O43680 179 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 BATFQ16520 125 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 LRP11Q86VZ4 500 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 IL1F10Q8WWZ1 152 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 DLL3Q9NYJ7 618 aa11.42□□□□□ -0.58
C9orf78-205ENST00000480023 CNTRLQ7Z7A1 2325 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 SYNGR1O43759 233 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 CRYAAP02489 173 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 CCL3P10147 92 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 EGR1P18146 543 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 TFPI2P48307 235 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 VEGFBP49765 207 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 DRAM1Q8N682 238 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 OR10G8Q8NGN5 311 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 CIB3Q96Q77 187 aaPredicted RBP11.41□□□□□ -0.58
C9orf78-205ENST00000480023 OR6C1Q96RD1 312 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 MRPL18Q9H0U6 180 aaKnown RBP11.41□□□□□ -0.58
C9orf78-205ENST00000480023 SH2D2AQ9NP31 389 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 RANBP2P49792 3224 aaKnown RBP11.41□□□□□ -0.58
C9orf78-205ENST00000480023 ARHGAP21Q5T5U3 1957 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 LRRC30A6NM36 301 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 SCRG1O75711 98 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 CBLN1P23435 193 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 GNG10P50151 68 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 RBX1P62877 108 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 TRA2AQ13595 282 aaKnown RBP eCLIP11.41□□□□□ -0.58
C9orf78-205ENST00000480023 MYPOPQ86VE0 399 aaPredicted RBP11.41□□□□□ -0.58
C9orf78-205ENST00000480023 C1orf174Q8IYL3 243 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 DEFB119Q8N690 84 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 CCDC74BQ96LY2 380 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 GAL3ST2Q9H3Q3 398 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 ZNF703Q9H7S9 590 aaPredicted RBP11.41□□□□□ -0.58
C9orf78-205ENST00000480023 IL36BQ9NZH7 164 aa11.41□□□□□ -0.58
C9orf78-205ENST00000480023 TRBV9A0A0B4J1U6 114 aa11.4□□□□□ -0.58
C9orf78-205ENST00000480023 TRAV39A0A0B4J263 110 aa11.4□□□□□ -0.58
C9orf78-205ENST00000480023 PGPEP1LA6NFU8 196 aa11.4□□□□□ -0.58
C9orf78-205ENST00000480023 SS18L1O75177 396 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms