RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ACP1P24666 158 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 PDLIM4P50479 330 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM3BP58499 235 aaPredicted RBP11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 SRSF7Q16629 238 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 ZNF585BQ52M93 769 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 USF3Q68DE3 2245 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 MRPL41Q8IXM3 137 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 AGMATQ9BSE5 352 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 REPIN1Q9BWE0 567 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 SPRY4Q9C004 299 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 ZNF703Q9H7S9 590 aaPredicted RBP11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 TRAV24A0A0B4J272 114 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 IGHV3-64DA0A0J9YX35 117 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 CD300LBA8K4G0 201 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 GCGP01275 180 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 TNFRSF9Q07011 255 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 NUFIP2Q7Z417 695 aaKnown RBP11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 LRP11Q86VZ4 500 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 OR4F5Q8NH21 305 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 OR4F4Q96R69 305 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 IL17BQ9UHF5 180 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 RNF150Q9ULK6 438 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A10PA6NDY2 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A18PA6NE21 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A16PA6NEW6 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A20PA6NIJ5 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A8PA6NJQ4 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A7PA6NKC0 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A22PA8MWA6 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A12PA8MX19 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A5PA8MXJ8 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A23PA8MXZ1 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 HRASP01112 189 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A15PP0C7V4 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A13PP0C7W8 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A14PP0C7W9 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM90A24PP0C7X0 464 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 BMP5P22003 454 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 TGIF2LYQ8IUE0 185 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 OR5B12Q96R08 314 aa11.24□□□□□ -0.61
PDZRN3-208ENST00000479530 MARCH11A6NNE9 402 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 C1QTNF9BB2RNN3 333 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 TRAPPC2LH3BP13 241 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 NUPR1O60356 82 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 IFNA1P01562 189 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 IGHEP01854 428 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 EGR1P18146 543 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 CD33P20138 364 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 HBG1P69891 147 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 HBG2P69892 147 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 SLC38A11Q08AI6 406 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 ATP1A1-AS1Q5TC04 95 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 PRDM14Q9GZV8 571 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 CTXN2P0C2S0 81 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 SLC25A6P12236 298 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 NPPCP23582 126 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 CHRNA7P36544 502 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 OR1C1Q15619 314 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 SPATA46Q5T0L3 261 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 TMEM251Q8N6I4 163 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 OR5P3Q8WZ94 311 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 TECTBQ96PL2 329 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 TTTY12Q9BZ98 90 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 C12orf49Q9H741 205 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 MED12LQ86YW9 2145 aa11.23□□□□□ -0.61
PDZRN3-208ENST00000479530 WDR1O75083 606 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 WNT5AP41221 380 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 PMP22Q01453 160 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 CEACAM21Q3KPI0 293 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 OR51I2Q9H344 312 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 OR6C3Q9NZP0 311 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 BOKQ9UMX3 212 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 IGKV3D-15A0A087WSY6 115 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 LNP1A1A4G5 178 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 GYPAP02724 150 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 RAB4AP20338 218 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 ACSF3Q4G176 576 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 OR2T10Q8NGZ9 312 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 PINX1Q96BK5 328 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 CLDN1O95832 211 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 PSMB3P49720 205 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 HOXA4Q00056 320 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 ABHD17BQ5VST6 288 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 MRPL21Q7Z2W9 205 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 MKXQ8IYA7 352 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 LSM10Q969L4 123 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 TMEM45BQ96B21 275 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 TMEM18Q96B42 140 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 FAM173AQ9BQD7 235 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 KCNS2Q9ULS6 477 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 CACNA1DQ01668 2161 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 PRR14LQ5THK1 2151 aa11.22□□□□□ -0.61
PDZRN3-208ENST00000479530 COL27A1Q8IZC6 1860 aaPredicted RBP11.21□□□□□ -0.61
PDZRN3-208ENST00000479530 GTF3C1Q12789 2109 aa11.21□□□□□ -0.61
PDZRN3-208ENST00000479530 PAGE4O60829 102 aa11.21□□□□□ -0.61
PDZRN3-208ENST00000479530 RHBDL1O75783 438 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms