RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 IGKV1-9A0A0C4DH69 117 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 OR5B21A6NL26 309 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 NPIPA5E9PKD4 350 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 K7EM74 188 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 M0QZ24 198 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 ADAM20O43506 726 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 KLF7O75840 302 aaPredicted RBP11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 CEACAM4O75871 244 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 SERF1AO75920 110 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 UTS2O95399 124 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 TMEM50AO95807 157 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 REG1AP05451 166 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 GP1BBP13224 206 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 VDAC1P21796 283 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 ARR3P36575 388 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 FMODQ06828 376 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 ZP4Q12836 540 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 KLRB1Q12918 225 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 OR8B8Q15620 311 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 NMSQ5H8A3 153 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 LDLRAD2Q5SZI1 272 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 FAM69BQ5VUD6 431 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 VHLLQ6RSH7 139 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 UEVLDQ8IX04 471 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 SELENOHQ8IZQ5 122 aaKnown RBP11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 OR8B12Q8NGG6 310 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 DGAT2Q96PD7 388 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 SLC39A9Q9NUM3 307 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 NPIPA1Q9UND3 350 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 PPIAL4AQ9Y536 164 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 TIMM9Q9Y5J7 89 aa11.21□□□□□ -0.62
CNKSR3-204ENST00000479339 ZNF814B7Z6K7 855 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 HRKO00198 91 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 TMPRSS2O15393 492 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 CHST1O43916 411 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 TOX4O94842 621 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 PGCP20142 388 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 TSPOP30536 169 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 LHX2P50458 406 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 CLDN18P56856 261 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 LINC00310P59036 64 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 TLE1Q04724 770 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 MRPL14Q6P1L8 145 aaKnown RBP11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 Q8N976 141 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 OR11L1Q8NGX0 322 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 PLPPR1Q8TBJ4 325 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 C11orf40Q8WZ69 217 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 NEIL1Q96FI4 390 aaPredicted RBP11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 FAM71F1Q96KD3 344 aaPredicted RBP11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 HDHD3Q9BSH5 251 aaPredicted RBP11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 RSG1Q9BU20 258 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 KLHL13Q9P2N7 655 aa11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 GCN1Q92616 2671 aaKnown RBP11.2□□□□□ -0.62
CNKSR3-204ENST00000479339 A0A1B0GX78 115 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 ZNF17P17021 662 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 CD33P20138 364 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 PAX9P55771 341 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 RNPS1Q15287 305 aaKnown RBP11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 LRRC75BQ2VPJ9 315 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 OR2Y1Q8NGV0 311 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 VSIRQ9H7M9 311 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 CLN8Q9UBY8 286 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 SAA2-SAA4A0A096LPE2 208 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 ZNF253O75346 499 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 SLC25A6P12236 298 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 MSR1P21757 451 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 FOLR3P41439 243 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 CCL11P51671 97 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 RRADP55042 308 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 HBG1P69891 147 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 HBG2P69892 147 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 VAMP3Q15836 100 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 C1QL2Q7Z5L3 287 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 BAGE3Q86Y29 109 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 BAGE2Q86Y30 109 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 PP6455Q8WZ26 134 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 ZNF524Q96C55 264 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 FBXL7Q9UJT9 491 aa11.19□□□□□ -0.62
CNKSR3-204ENST00000479339 TMED7-TICAM2A0A0A6YYA0 188 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 A0A1W2PRS3 328 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 VSTM2BA6NLU5 285 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 CNOT4O95628 575 aaKnown RBP11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 GLI4P10075 376 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 OTX2P32243 289 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 GABRA2P47869 451 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 LRRC10Q5BKY1 277 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 CRIP3Q6Q6R5 217 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 PET117Q6UWS5 81 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 LHFPL4Q7Z7J7 247 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 ZNF525Q8N782 197 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 OR4F5Q8NH21 305 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 PSMF1Q92530 271 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 SPSB1Q96BD6 273 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 OR4F4Q96R69 305 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 HELZ2Q9BYK8 2649 aaKnown RBP11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 TLN1Q9Y490 2541 aaKnown RBP11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 BSNQ9UPA5 3926 aa11.18□□□□□ -0.62
CNKSR3-204ENST00000479339 TRBV9A0A0B4J1U6 114 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms