RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 BVESQ8NE79 360 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 FAM216AQ8WUB2 273 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 CAPSLQ8WWF8 208 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 SLC25A21Q9BQT8 299 aaPredicted RBP10.6□□□□□ -0.71
CHD3-210ENST00000479080 MRPL20Q9BYC9 149 aaKnown RBP10.6□□□□□ -0.71
CHD3-210ENST00000479080 SLC2A9Q9NRM0 540 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 KCNS2Q9ULS6 477 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 NUBP2Q9Y5Y2 271 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 ACANP16112 2415 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 ABCA1O95477 2261 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 A0A1W2PPI3 338 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 GPR31O00270 319 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 NPFFO15130 113 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 PGLYRP1O75594 196 aaPredicted RBP10.59□□□□□ -0.71
CHD3-210ENST00000479080 LY6G6DO95868 133 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 SAA4P35542 130 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 REG1BP48304 166 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 DHODHQ02127 395 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 TPTE2P1Q5T6R2 138 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 ZNF383Q8NA42 475 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 DDB2Q92466 427 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 NABP2Q9BQ15 211 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 MARVELD1Q9BSK0 173 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 BEX2Q9BXY8 128 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 BEX1Q9HBH7 125 aa10.59□□□□□ -0.71
CHD3-210ENST00000479080 CRYM-AS1A6NIL9 109 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 M0R1X1 148 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 TOR1AO14656 332 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 RAB29O14966 203 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 H2AFB2P0C5Z0 115 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 CT45A6P0DMU7 189 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 CT45A5P0DMU8 189 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 CT45A7P0DMV0 189 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 DUTP33316 252 aaKnown RBP10.58□□□□□ -0.72
CHD3-210ENST00000479080 ECI1P42126 302 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 GPR12P47775 334 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 PIGPP57054 158 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 RAB25P57735 213 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 ZNF816Q0VGE8 651 aaPredicted RBP10.58□□□□□ -0.72
CHD3-210ENST00000479080 TUSC1Q2TAM9 212 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 GLDNQ6ZMI3 551 aaPredicted RBP10.58□□□□□ -0.72
CHD3-210ENST00000479080 TMED4Q7Z7H5 227 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 SLC25A42Q86VD7 318 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 DRAXINQ8NBI3 349 aaPredicted RBP10.58□□□□□ -0.72
CHD3-210ENST00000479080 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.58□□□□□ -0.72
CHD3-210ENST00000479080 OR10X1Q8NGY0 326 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 RTN4IP1Q8WWV3 396 aaPredicted RBP10.58□□□□□ -0.72
CHD3-210ENST00000479080 CFHR4Q92496 578 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 AKR1E2Q96JD6 320 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 GSX1Q9H4S2 264 aaPredicted RBP10.58□□□□□ -0.72
CHD3-210ENST00000479080 PRR13Q9NZ81 148 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 PIPOXQ9P0Z9 390 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 RBM7Q9Y580 266 aaKnown RBP10.58□□□□□ -0.72
CHD3-210ENST00000479080 CSPG4Q6UVK1 2322 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 WNK2Q9Y3S1 2297 aa10.58□□□□□ -0.72
CHD3-210ENST00000479080 HIVEP1P15822 2718 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 A0A0U1RQK1 487 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 A8MV72 311 aaPredicted RBP10.57□□□□□ -0.72
CHD3-210ENST00000479080 RLN1P04808 185 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 CD99P14209 185 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 PRRX1P54821 245 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 PPP1R1AQ13522 171 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 FAM71F2Q6NXP2 309 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 TBC1D26Q86UD7 250 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 BCL6BQ8N143 479 aaPredicted RBP10.57□□□□□ -0.72
CHD3-210ENST00000479080 OR52B4Q8NGK2 314 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 ZFAND1Q8TCF1 268 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 ZNF486Q96H40 463 aaPredicted RBP10.57□□□□□ -0.72
CHD3-210ENST00000479080 TP53RKQ96S44 253 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 SEC22CQ9BRL7 303 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 YAE1D1Q9NRH1 226 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 COPZ2Q9P299 210 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 DPM3Q9P2X0 92 aa10.57□□□□□ -0.72
CHD3-210ENST00000479080 MDFIC2A0A1B0GVS7 189 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 INMT-MINDY4F8WBC2 141 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 MPPED1O15442 326 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 IGKV1-39P01597 117 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 IGKV1D-39P04432 117 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 HTR1DP28221 377 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 MIDNQ504T8 468 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 ZNF585BQ52M93 769 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 MINOS1Q5TGZ0 78 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 GPR157Q5UAW9 335 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 PLET1Q6UQ28 207 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 Q6ZNX1 250 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 ZBTB34Q8NCN2 500 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 LHFPL5Q8TAF8 219 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 NAA60Q9H7X0 242 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 C14orf166Q9Y224 244 aaKnown RBP10.56□□□□□ -0.72
CHD3-210ENST00000479080 TBL2Q9Y4P3 447 aaKnown RBP10.56□□□□□ -0.72
CHD3-210ENST00000479080 AMMECR1Q9Y4X0 333 aaPredicted RBP10.56□□□□□ -0.72
CHD3-210ENST00000479080 MINOS1-NBL1R4GNA1 71 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 ZFHX3Q15911 3703 aa10.56□□□□□ -0.72
CHD3-210ENST00000479080 IGHV3-72A0A0B4J1Y9 119 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 IGHV1-3A0A0C4DH29 117 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 LEUTXA8MZ59 168 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 H0YJW9 148 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 PEX14O75381 377 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 OR4E1P0C645 316 aa10.55□□□□□ -0.72
CHD3-210ENST00000479080 AKR1C4P17516 323 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms