RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ADAM30Q9UKF2 790 aa16.31■□□□□ 0.2
VARS-224ENST00000479051 GAB2Q9UQC2 676 aa16.31■□□□□ 0.2
VARS-224ENST00000479051 ANK2Q01484 3957 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 AMY1AP04745 511 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 AMY2AP04746 511 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 CT45A6P0DMU7 189 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 CT45A5P0DMU8 189 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 CT45A7P0DMV0 189 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 LUMP51884 338 aaPredicted RBP16.3■□□□□ 0.2
VARS-224ENST00000479051 CITED1Q99966 193 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 RASL11BQ9BPW5 248 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 NECAP2Q9NVZ3 263 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 OR2W1Q9Y3N9 320 aa16.3■□□□□ 0.2
VARS-224ENST00000479051 MEIS3P1A6NDR6 274 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 H3BMQ9 156 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 H7C2Y5 167 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 M0R1X1 148 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 RGS5O15539 181 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 SLC22A5O76082 557 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 APOA2P02652 100 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 NFYAP23511 347 aaPredicted RBP16.29■□□□□ 0.2
VARS-224ENST00000479051 ACTBP60709 375 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 MMDQ15546 238 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 FAM131AQ6UXB0 335 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 Q6ZS46 218 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 C15orf40Q8WUR7 153 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 SCPEP1Q9HB40 452 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 LIN7CQ9NUP9 197 aaKnown RBP16.29■□□□□ 0.2
VARS-224ENST00000479051 WASHC3Q9Y3C0 194 aa16.29■□□□□ 0.2
VARS-224ENST00000479051 SH2D7A6NKC9 451 aaPredicted RBP16.28■□□□□ 0.2
VARS-224ENST00000479051 RBBP9O75884 186 aa16.28■□□□□ 0.2
VARS-224ENST00000479051 TMEM95Q3KNT9 176 aa16.28■□□□□ 0.2
VARS-224ENST00000479051 GLDNQ6ZMI3 551 aaPredicted RBP16.28■□□□□ 0.2
VARS-224ENST00000479051 OR5AP2Q8NGF4 316 aa16.28■□□□□ 0.2
VARS-224ENST00000479051 OR5AN1Q8NGI8 311 aa16.28■□□□□ 0.2
VARS-224ENST00000479051 DYNC2LI1Q8TCX1 351 aa16.28■□□□□ 0.2
VARS-224ENST00000479051 SDHAF2Q9NX18 166 aa16.28■□□□□ 0.2
VARS-224ENST00000479051 KIAA1456Q9P272 454 aa16.28■□□□□ 0.2
VARS-224ENST00000479051 EXTL2Q9UBQ6 330 aa16.28■□□□□ 0.2
VARS-224ENST00000479051 CEPT1Q9Y6K0 416 aa16.28■□□□□ 0.2
VARS-224ENST00000479051 H0YJW9 148 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 TPPPO94811 219 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 HLA-DQB1P01920 261 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 FCER2P06734 321 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 TAS2R46P59540 309 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 TAGLNQ01995 201 aaKnown RBP16.27■□□□□ 0.2
VARS-224ENST00000479051 SRSF4Q08170 494 aaKnown RBP16.27■□□□□ 0.2
VARS-224ENST00000479051 CBX3Q13185 183 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 CDK10Q15131 360 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 SNX29P2Q8IUI4 249 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 Q8N9W7 124 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 DRAXINQ8NBI3 349 aaPredicted RBP16.27■□□□□ 0.2
VARS-224ENST00000479051 ADTRPQ96IZ2 230 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 WNT10AQ9GZT5 417 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 PLSCR3Q9NRY6 295 aa16.27■□□□□ 0.2
VARS-224ENST00000479051 J3QRK9 145 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 SULT1C2O00338 296 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 OR5H8P0DN80 308 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 FCGR2CP31995 323 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 THBS3P49746 956 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 KRTAP10-3P60369 221 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 SLC35E3Q7Z769 313 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 CENPVQ7Z7K6 275 aaPredicted RBP16.26■□□□□ 0.19
VARS-224ENST00000479051 PDPNQ86YL7 162 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 FOXRED2Q8IWF2 684 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 ZNF645Q8N7E2 425 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 SNAPC3Q92966 411 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 RNF5Q99942 180 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 ANAPC10Q9UM13 185 aa16.26■□□□□ 0.19
VARS-224ENST00000479051 M0QZ24 198 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 NBR2O15453 112 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 KCNAB3O43448 404 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 PROP1O75360 226 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 FBXO24O75426 580 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 F2RL1P55085 397 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 FAM71E2Q8N5Q1 922 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 ZNF383Q8NA42 475 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 OR5H2Q8NGV7 314 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 GPX8Q8TED1 209 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 SLC35D1Q9NTN3 355 aa16.25■□□□□ 0.19
VARS-224ENST00000479051 TUSC2O75896 110 aa16.24■□□□□ 0.19
VARS-224ENST00000479051 IGHG2P01859 326 aa16.24■□□□□ 0.19
VARS-224ENST00000479051 RRASP10301 218 aa16.24■□□□□ 0.19
VARS-224ENST00000479051 RTL8BQ17RB0 113 aa16.24■□□□□ 0.19
VARS-224ENST00000479051 NPBQ8NG41 125 aa16.24■□□□□ 0.19
VARS-224ENST00000479051 TSNAXQ99598 290 aaKnown RBP16.24■□□□□ 0.19
VARS-224ENST00000479051 C6orf62Q9GZU0 229 aaPredicted RBP16.24■□□□□ 0.19
VARS-224ENST00000479051 EHFQ9NZC4 300 aa16.24■□□□□ 0.19
VARS-224ENST00000479051 RSL24D1Q9UHA3 163 aaKnown RBP16.24■□□□□ 0.19
VARS-224ENST00000479051 CTDSP2O14595 271 aa16.23■□□□□ 0.19
VARS-224ENST00000479051 NAT1P18440 290 aa16.23■□□□□ 0.19
VARS-224ENST00000479051 RCVRNP35243 200 aa16.23■□□□□ 0.19
VARS-224ENST00000479051 PLGLAQ15195 96 aa16.23■□□□□ 0.19
VARS-224ENST00000479051 LAX1Q8IWV1 398 aa16.23■□□□□ 0.19
VARS-224ENST00000479051 CHPT1Q8WUD6 406 aa16.23■□□□□ 0.19
VARS-224ENST00000479051 FLYWCH2Q96CP2 140 aaKnown RBP16.23■□□□□ 0.19
VARS-224ENST00000479051 RABL2AQ9UBK7 228 aaPredicted RBP16.23■□□□□ 0.19
VARS-224ENST00000479051 RABL2BQ9UNT1 228 aa16.23■□□□□ 0.19
VARS-224ENST00000479051 ZNF701M0R085 212 aaPredicted RBP16.22■□□□□ 0.19
VARS-224ENST00000479051 AP4M1O00189 453 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms