RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 C17orf98A8MV24 154 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 IGKV1D-33P01593 117 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 IGKV1-33P01594 117 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HBZP02008 142 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HSPB1P04792 205 aaKnown RBP9.06□□□□□ -0.96
VPS52-217ENST00000478934 RAC2P15153 192 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 GABRA2P47869 451 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 RAB2AP61019 212 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 FAM90A2PQ658T7 463 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 TCTEX1D2Q8WW35 142 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 OPN3Q9H1Y3 402 aaPredicted RBP9.06□□□□□ -0.96
VPS52-217ENST00000478934 POLDIP2Q9Y2S7 368 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 OR5H1A6NKK0 313 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 IQCF6A8MYZ5 107 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST1H2BKO60814 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 S1PR2O95136 353 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 CLDN1O95832 211 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST1H2BJP06899 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST1H2BOP23527 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST1H2BBP33778 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST1H2BDP58876 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST1H2BCP62807 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 TGFBR3Q03167 851 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 MRPL49Q13405 166 aaKnown RBP9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST2H2BEQ16778 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 MSMPQ1L6U9 139 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 FAM209BQ5JX69 171 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.06□□□□□ -0.96
VPS52-217ENST00000478934 Q6ZT83 130 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 KDF1Q8NAX2 398 aaPredicted RBP9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST1H2BHQ93079 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 ZDHHC16Q969W1 377 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST1H2BNQ99877 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 HIST1H2BMQ99879 126 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 GGACTQ9BVM4 153 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 RBKSQ9H477 322 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 WIPI2Q9Y4P8 454 aa9.06□□□□□ -0.96
VPS52-217ENST00000478934 NPIPB11E5RHQ5 1161 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 CECR9P0C854 216 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 IL2RGP31785 369 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 PYY3Q5JQD4 70 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 C9orf152Q5JTZ5 239 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 UTF1Q5T230 341 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 WDR25Q64LD2 544 aaPredicted RBP9.05□□□□□ -0.96
VPS52-217ENST00000478934 LRP11Q86VZ4 500 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 ZNF610Q8N9Z0 462 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 OR13A1Q8NGR1 328 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 LOXL4Q96JB6 756 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 RAB40CQ96S21 281 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 SLC25A22Q9H936 323 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 PARD6AQ9NPB6 346 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 PIEZO2Q9H5I5 2752 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 ZNF292O60281 2723 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 ST8SIA5O15466 376 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 TIMM8AO60220 97 aaPredicted RBP9.05□□□□□ -0.96
VPS52-217ENST00000478934 DFFBO76075 338 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 BCL2P10415 239 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 CEACAM1P13688 526 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 COL8A2P25067 703 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 MDH2P40926 338 aaKnown RBP9.05□□□□□ -0.96
VPS52-217ENST00000478934 COL10A1Q03692 680 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 EDDM3AQ14507 147 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 WDR82Q6UXN9 313 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 MALSU1Q96EH3 234 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 GPR61Q9BZJ8 451 aa9.05□□□□□ -0.96
VPS52-217ENST00000478934 BTBD17A6NE02 478 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 LINC00473A8K010 186 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 SOD3P08294 240 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 RPRMLQ8N4K4 120 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 OR8G5Q8NG78 346 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 LSM10Q969L4 123 aaKnown RBP9.04□□□□□ -0.96
VPS52-217ENST00000478934 GALMQ96C23 342 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 TOLLIPQ9H0E2 274 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 LIN7CQ9NUP9 197 aaKnown RBP9.04□□□□□ -0.96
VPS52-217ENST00000478934 IGHV3OR15-7A0A075B7D8 119 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 TMEM30CPA0ZSE6 113 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 EGR1P18146 543 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 DEFB109BQ30KR1 87 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 KHDC3LQ587J8 217 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 ACP7Q6ZNF0 438 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 Q8IYB0 196 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 RPP25LQ8N5L8 163 aaKnown RBP9.04□□□□□ -0.96
VPS52-217ENST00000478934 OR5T1Q8NG75 326 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 OR10D4PQ8NGN7 298 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 FRZBQ92765 325 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 RPUSD4Q96CM3 377 aaKnown RBP9.04□□□□□ -0.96
VPS52-217ENST00000478934 TAAR6Q96RI8 345 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 FAM234AQ9H0X4 552 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 UNKLQ9H9P5 680 aaKnown RBP9.04□□□□□ -0.96
VPS52-217ENST00000478934 HES4Q9HCC6 221 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 TREM2Q9NZC2 230 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 ROS1P08922 2347 aa9.04□□□□□ -0.96
VPS52-217ENST00000478934 MAP1LC3B2A6NCE7 125 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 GALR2O43603 387 aaPredicted RBP9.03□□□□□ -0.96
VPS52-217ENST00000478934 ZG16O60844 167 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 RBMXL2O75526 392 aaKnown RBP9.03□□□□□ -0.96
VPS52-217ENST00000478934 IGKV3-15P01624 115 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 S100A12P80511 92 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 SLC38A11Q08AI6 406 aa9.03□□□□□ -0.96
VPS52-217ENST00000478934 RTP5Q14D33 572 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms