RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 ZFP1Q6P2D0 407 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 GLDNQ6ZMI3 551 aaPredicted RBP7.36□□□□□ -1.23
CCM2-210ENST00000478169 Q8N402 240 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 NKAIN3Q8N8D7 197 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 POC5Q8NA72 575 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 IL1F10Q8WWZ1 152 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 PGLYRP3Q96LB9 341 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 NEDD4LQ96PU5 975 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 CLCC1Q96S66 551 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 TSNAXQ99598 290 aaKnown RBP7.36□□□□□ -1.23
CCM2-210ENST00000478169 UQCC2Q9BRT2 126 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 AGMATQ9BSE5 352 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 TMED9Q9BVK6 235 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 ZNF355PQ9NSJ1 428 aa7.36□□□□□ -1.23
CCM2-210ENST00000478169 METTL1Q9UBP6 276 aaKnown RBP7.36□□□□□ -1.23
CCM2-210ENST00000478169 DIMT1Q9UNQ2 313 aaKnown RBP7.36□□□□□ -1.23
CCM2-210ENST00000478169 EXOSC1Q9Y3B2 195 aaKnown RBP7.36□□□□□ -1.23
CCM2-210ENST00000478169 A0A1W2PPK0 400 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 SHISA3A0PJX4 238 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 WBP4O75554 376 aaKnown RBP7.35□□□□□ -1.23
CCM2-210ENST00000478169 BRI3O95415 125 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 UBBP0CG47 229 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 CPEP16870 476 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 MED21Q13503 144 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 FXYD3Q14802 87 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 TATDN3Q17R31 274 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 LINC00322Q6ZN03 302 aaPredicted RBP7.35□□□□□ -1.23
CCM2-210ENST00000478169 EDARADDQ8WWZ3 215 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 THRSPQ92748 146 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 FAM46BQ96A09 425 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 CYYR1Q96J86 154 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 TMEM68Q96MH6 324 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 SLC29A1Q99808 456 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 SULT4A1Q9BR01 284 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 HIPK2Q9H2X6 1198 aa7.35□□□□□ -1.23
CCM2-210ENST00000478169 ANKRD34BA5PLL1 514 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 NAPSAO96009 420 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 CSN3P07498 182 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 AADACP22760 399 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 SYNJ2BPP57105 145 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 TAS2R43P59537 309 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 RPS16P62249 146 aaKnown RBP7.34□□□□□ -1.23
CCM2-210ENST00000478169 ZNF880Q6PDB4 577 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 MOB1BQ7L9L4 216 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 SVOPQ8N4V2 548 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 ZNF485Q8NCK3 441 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 OR5T1Q8NG75 326 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 OR2K2Q8NGT1 345 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 GRPEL2Q8TAA5 225 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 TMEM80Q96HE8 168 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 ABHD14BQ96IU4 210 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 USMG5Q96IX5 58 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 DERL3Q96Q80 235 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 FAAP24Q9BTP7 215 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 RIMS4Q9H426 269 aaPredicted RBP7.34□□□□□ -1.23
CCM2-210ENST00000478169 BATF3Q9NR55 127 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 PEF1Q9UBV8 284 aaKnown RBP7.34□□□□□ -1.23
CCM2-210ENST00000478169 CLEC2DQ9UHP7 191 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 CEPT1Q9Y6K0 416 aa7.34□□□□□ -1.23
CCM2-210ENST00000478169 TRBV6-6A0A0A6YYG2 114 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 SLC25A17O43808 307 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 PROP1O75360 226 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 OR2A4O95047 310 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 CNIH1O95406 144 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 IGKV1-16P04430 117 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 CD1AP06126 327 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 ZBTB25P24278 435 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 MAPK3P27361 379 aaPredicted RBP7.33□□□□□ -1.24
CCM2-210ENST00000478169 CEACAM6P40199 344 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 MECP2P51608 486 aaKnown RBP7.33□□□□□ -1.24
CCM2-210ENST00000478169 RPS27AP62979 156 aaKnown RBP7.33□□□□□ -1.24
CCM2-210ENST00000478169 ZNF343Q6P1L6 599 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 C6orf201Q7Z4U5 140 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 PDPNQ86YL7 162 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 LAX1Q8IWV1 398 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 ZFP41Q8N8Y5 198 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 ZNF555Q8NEP9 628 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 PTX4Q96A99 478 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 TINAGL1Q9GZM7 467 aaPredicted RBP7.33□□□□□ -1.24
CCM2-210ENST00000478169 PARP12Q9H0J9 701 aaKnown RBP7.33□□□□□ -1.24
CCM2-210ENST00000478169 C11orf54Q9H0W9 315 aaPredicted RBP7.33□□□□□ -1.24
CCM2-210ENST00000478169 CHMP1AQ9HD42 196 aaPredicted RBP7.33□□□□□ -1.24
CCM2-210ENST00000478169 MGAT4AQ9UM21 535 aa7.33□□□□□ -1.24
CCM2-210ENST00000478169 AIREO43918 545 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 APOA2P02652 100 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 SNRPBP14678 240 aaKnown RBP7.32□□□□□ -1.24
CCM2-210ENST00000478169 LGALS7P47929 136 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 SSBP2P81877 361 aaPredicted RBP7.32□□□□□ -1.24
CCM2-210ENST00000478169 RPEL1Q2QD12 228 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 ZNF383Q8NA42 475 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 DRAXINQ8NBI3 349 aaPredicted RBP7.32□□□□□ -1.24
CCM2-210ENST00000478169 KCNG3Q8TAE7 436 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 SETD6Q8TBK2 473 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 SNAPC3Q92966 411 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 TM2D1Q9BX74 207 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 TMEM59Q9BXS4 323 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 RETNQ9HD89 108 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 PLEKHJ1Q9NW61 149 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 PEMTQ9UBM1 199 aa7.32□□□□□ -1.24
CCM2-210ENST00000478169 ZNF221Q9UK13 617 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms