RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TPTE2P1Q5T6R2 138 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 GDPD3Q7L5L3 318 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.09□□□□□ -1.91
VPS50-214ENST00000477935 NKAIN4Q8IVV8 208 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 OR8H1Q8NGG4 311 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 TMEM37Q8WXS4 190 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 RPL3LQ92901 407 aaKnown RBP3.09□□□□□ -1.91
VPS50-214ENST00000477935 ITFG2Q969R8 447 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 C9orf85Q96MD7 179 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 KCTD7Q96MP8 289 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 NDEL1Q9GZM8 345 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 RAB17Q9H0T7 212 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 PIGLQ9Y2B2 252 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 LHFPL6Q9Y693 200 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 LINC00312Q9Y6C7 94 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 VPS13BQ7Z7G8 4022 aa3.09□□□□□ -1.92
VPS50-214ENST00000477935 LOC102724200A0A096LPH7 203 aaPredicted RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 TRBV2A0A0J9YWF9 115 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 FAM183AA6NL82 134 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 CPSF4LA6NMK7 179 aaKnown RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 NCBP2LA6PVI3 153 aaKnown RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 IGLL5B9A064 214 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 PLIN3O60664 434 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 SLC16A7O60669 478 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 TFF1P04155 84 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 LGALS1P09382 135 aaKnown RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 P0DMU3 169 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 FAM231AP0DMU4 169 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 FAM231CP0DMU5 169 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 PIPP12273 146 aaPredicted RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 MGMTP16455 207 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 ZP3P21754 424 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 CD34P28906 385 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 CRABP1P29762 137 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 PRDX6P30041 224 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 OTX1P32242 354 aaPredicted RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 SOX6P35712 828 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 RAB7AP51149 207 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 FAM3AP98173 230 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 CDK6Q00534 326 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 EBI3Q14213 229 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 HLA-DRB5Q30154 266 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 AGKQ53H12 422 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 GLYATL3Q5SZD4 288 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 DNM1P34Q6PK57 102 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 ATRAIDQ6UW56 229 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 OR6V1Q8N148 313 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 OR2AE1Q8NHA4 323 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 TMEM239Q8WW34 195 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 OR5P3Q8WZ94 311 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 FRZBQ92765 325 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 MAL2Q969L2 176 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 RPEQ96AT9 228 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 RNF170Q96K19 258 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 OR5B12Q96R08 314 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 RASL11BQ9BPW5 248 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 PRSS27Q9BQR3 290 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 GGTLC1Q9BX51 225 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 POLR2J2Q9GZM3 115 aaKnown RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 POLR2J3Q9H1A7 115 aaKnown RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 NMNAT1Q9HAN9 279 aaPredicted RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 PLSCR3Q9NRY6 295 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 NINJ2Q9NZG7 142 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 CYB5R1Q9UHQ9 305 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 ENPP5Q9UJA9 477 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 COPS3Q9UNS2 423 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 ERGIC3Q9Y282 383 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 MED31Q9Y3C7 131 aa3.08□□□□□ -1.92
VPS50-214ENST00000477935 AMMECR1Q9Y4X0 333 aaPredicted RBP3.08□□□□□ -1.92
VPS50-214ENST00000477935 DLGAP1O14490 977 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 NOS1APO75052 506 aaPredicted RBP3.07□□□□□ -1.92
VPS50-214ENST00000477935 CST4P01036 141 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 APOC1P02654 83 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 CD14P08571 375 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 CT45A10P0DMU9 189 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 ELK1P19419 428 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 APOC4P55056 127 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 EDDM3BP56851 147 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 GNG3P63215 75 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 C1orf134Q5TEV5 83 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 ETFRF1Q6IPR1 90 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 HEPN1Q6WQI6 88 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 DPY19L2P2Q6ZN68 376 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 CCDC80Q76M96 950 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 SLC16A13Q7RTY0 426 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 OAFQ86UD1 273 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 C4orf33Q8N1A6 199 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 DEFB125Q8N687 156 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 LRRC75AQ8NAA5 344 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 OR9G4Q8NGQ1 327 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 OR2T10Q8NGZ9 312 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 OR56B4Q8NH76 319 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 TRMT10AQ8TBZ6 339 aaKnown RBP3.07□□□□□ -1.92
VPS50-214ENST00000477935 HAVCR2Q8TDQ0 301 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 PHYHIPQ92561 330 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 OR8B4Q96RC9 309 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 SYT4Q9H2B2 425 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 OR51I2Q9H344 312 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 GAL3ST2Q9H3Q3 398 aa3.07□□□□□ -1.92
VPS50-214ENST00000477935 RGCCQ9H4X1 137 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms