RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 FGF8P55075 233 aaPredicted RBP15.2■□□□□ 0.02
CCM2-209ENST00000477605 CYP2G1PQ6ZSU1 146 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 SLC25A40Q8TBP6 338 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 DEFB127Q9H1M4 99 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 ZDHHC11Q9H8X9 412 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 DOCK10Q96BY6 2186 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 CNTRLQ7Z7A1 2325 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 CTXND1A0A1B0GTU2 59 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 UBE2L5PA0A1B0GUS4 154 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 RAB29O14966 203 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 LY86O95711 162 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 PTBP3O95758 552 aaKnown RBP15.2■□□□□ 0.02
CCM2-209ENST00000477605 IL2RGP31785 369 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 MEF2BQ02080 365 aaPredicted RBP15.2■□□□□ 0.02
CCM2-209ENST00000477605 RPP25LQ8N5L8 163 aaKnown RBP15.2■□□□□ 0.02
CCM2-209ENST00000477605 EDARADDQ8WWZ3 215 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 SPRR3Q9UBC9 169 aa15.2■□□□□ 0.02
CCM2-209ENST00000477605 SPEGQ15772 3267 aa15.19■□□□□ 0.02
CCM2-209ENST00000477605 PSMB3P49720 205 aa15.19■□□□□ 0.02
CCM2-209ENST00000477605 TMEM241Q24JQ0 296 aa15.19■□□□□ 0.02
CCM2-209ENST00000477605 HIST3H2BBQ8N257 126 aa15.19■□□□□ 0.02
CCM2-209ENST00000477605 TMEM178AQ8NBL3 297 aa15.19■□□□□ 0.02
CCM2-209ENST00000477605 MANBALQ9NQG1 85 aa15.19■□□□□ 0.02
CCM2-209ENST00000477605 ZMAT5Q9UDW3 170 aaKnown RBP15.19■□□□□ 0.02
CCM2-209ENST00000477605 C12orf77C9JDV5 145 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 KBTBD11O94819 623 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 CLDN14O95500 239 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 OR3A1P47881 315 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 ELLP55199 621 aaPredicted RBP15.18■□□□□ 0.02
CCM2-209ENST00000477605 PSG7Q13046 419 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 PYY3Q5JQD4 70 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 OR8G2PQ6IF36 304 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 SPNS3Q6ZMD2 512 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 ZNF66Q6ZN08 573 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 WDR31Q8NA23 367 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 OR10P1Q8NGE3 313 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 OR1L1Q8NH94 360 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 NINJ1Q92982 152 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 TAAR6Q96RI8 345 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 OR2D2Q9H210 308 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 IL17BQ9UHF5 180 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 GRPP07492 148 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 CELA3BP08861 270 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 TRGC1P0CF51 173 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 IDH3GP51553 393 aaPredicted RBP15.18■□□□□ 0.02
CCM2-209ENST00000477605 VWC2Q2TAL6 325 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 ABHD5Q8WTS1 349 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 SMIM7Q9BQ49 75 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 PYGO2Q9BRQ0 406 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 ACTR3CQ9C0K3 210 aaPredicted RBP15.18■□□□□ 0.02
CCM2-209ENST00000477605 CXXC4Q9H2H0 198 aa15.18■□□□□ 0.02
CCM2-209ENST00000477605 FREM1Q5H8C1 2179 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 TRAV20A0A0B4J274 112 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 ZNF729A6NN14 1252 aaPredicted RBP15.17■□□□□ 0.02
CCM2-209ENST00000477605 PMS2P5A8MQ11 134 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 IFNL4K9M1U5 179 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 PHOX2AO14813 284 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 ATXN7O15265 892 aaPredicted RBP15.17■□□□□ 0.02
CCM2-209ENST00000477605 GATCO43716 136 aaKnown RBP15.17■□□□□ 0.02
CCM2-209ENST00000477605 SOX15O60248 233 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 PSPNO60542 156 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 CD59P13987 128 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 IGHV1-2P23083 117 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 NCR3LG1Q68D85 454 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 MYPOPQ86VE0 399 aaPredicted RBP15.17■□□□□ 0.02
CCM2-209ENST00000477605 UBALD1Q8TB05 177 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 FAM216AQ8WUB2 273 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 FRZBQ92765 325 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 LURAP1Q96LR2 239 aa15.17■□□□□ 0.02
CCM2-209ENST00000477605 ODAMA1E959 279 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 KRASP01116 189 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 HBZP02008 142 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 COX5AP20674 150 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 GNB2P62879 340 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 TRAT1Q6PIZ9 186 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 SRD5A3Q9H8P0 318 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 RAMP3O60896 148 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 TNFSF15O95150 251 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 IGKV1D-33P01593 117 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 IGKV1-33P01594 117 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 G6PCP35575 357 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 SOX8P57073 446 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 ERVS71-1P61550 626 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 RPL30P62888 115 aaKnown RBP15.16■□□□□ 0.02
CCM2-209ENST00000477605 ALKBH6Q3KRA9 238 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 ACSM6Q6P461 480 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 TGIF2LYQ8IUE0 185 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 OR10A7Q8NGE5 316 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 KLF14Q8TD94 323 aaPredicted RBP15.16■□□□□ 0.02
CCM2-209ENST00000477605 DTD1Q8TEA8 209 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 OBP2BQ9NPH6 170 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 PITPNC1Q9UKF7 332 aa15.16■□□□□ 0.02
CCM2-209ENST00000477605 C17orf112F2Z3M2 114 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 PAX5Q02548 391 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 FAM209BQ5JX69 171 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 Q6ZT83 130 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 C11orf53Q8IXP5 236 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 OR52L2PQ8NGH6 319 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 OR10G9Q8NGN4 311 aa15.15■□□□□ 0.02
CCM2-209ENST00000477605 OR10G7Q8NGN6 311 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms