RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TREML4Q6UXN2 200 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 LIAT1Q6ZQX7 453 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 LYSMD2Q8IV50 215 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 OR52L2PQ8NGH6 319 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 OR4A4PQ8NGN8 299 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 RPEQ96AT9 228 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 SLC25A33Q9BSK2 321 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 RANBP3Q9H6Z4 567 aaPredicted RBP14.07□□□□□ -0.16
PTPN7-209ENST00000477554 TET2Q6N021 2002 aaPredicted RBP14.07□□□□□ -0.16
PTPN7-209ENST00000477554 FABP7O15540 132 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 CTXN2P0C2S0 81 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 CD28P10747 220 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 HLA-DMAP28067 261 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 OR3A3P47888 321 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 CT45A1Q5HYN5 189 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 STEAP1BQ6NZ63 245 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 C10orf99Q6UWK7 81 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 OR5H2Q8NGV7 314 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 OR2T6Q8NHC8 308 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 CT45A3Q8NHU0 189 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 WIPF2Q8TF74 440 aaPredicted RBP14.07□□□□□ -0.16
PTPN7-209ENST00000477554 CAPSLQ8WWF8 208 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 RAB18Q9NP72 206 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 NECAP2Q9NVZ3 263 aa14.07□□□□□ -0.16
PTPN7-209ENST00000477554 FAM90A9PA6NNJ1 464 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 CENPXA8MT69 81 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 DIRAS3O95661 229 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 CD74P04233 296 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 CD3DP04234 171 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 GSTT2P0CG29 244 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 HRH1P35367 487 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 KLF9Q13886 244 aaPredicted RBP14.06□□□□□ -0.16
PTPN7-209ENST00000477554 HNF4GQ14541 408 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 MEF2DQ14814 521 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 ABCA11PQ4W5N1 156 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 STEAP3Q658P3 488 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 OR10A7Q8NGE5 316 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 OR10X1Q8NGY0 326 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 ST6GALNAC6Q969X2 333 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 GALMQ96C23 342 aa14.06□□□□□ -0.16
PTPN7-209ENST00000477554 C7orf50Q9BRJ6 194 aaKnown RBP14.06□□□□□ -0.16
PTPN7-209ENST00000477554 PARP12Q9H0J9 701 aaKnown RBP14.06□□□□□ -0.16
PTPN7-209ENST00000477554 IGKV1D-8A0A087WSZ0 117 aa14.05□□□□□ -0.16
PTPN7-209ENST00000477554 HSD17B6O14756 317 aa14.05□□□□□ -0.16
PTPN7-209ENST00000477554 RAB3DO95716 219 aa14.05□□□□□ -0.16
PTPN7-209ENST00000477554 SCTP09683 121 aa14.05□□□□□ -0.16
PTPN7-209ENST00000477554 PPP1CCP36873 323 aaKnown RBP14.05□□□□□ -0.16
PTPN7-209ENST00000477554 DEFA1P59665 94 aa14.05□□□□□ -0.16
PTPN7-209ENST00000477554 DEFA3P59666 94 aa14.05□□□□□ -0.16
PTPN7-209ENST00000477554 CDK10Q15131 360 aa14.05□□□□□ -0.16
PTPN7-209ENST00000477554 TMEM30BQ3MIR4 351 aa14.05□□□□□ -0.16
PTPN7-209ENST00000477554 RNASE10Q5GAN6 216 aaKnown RBP14.05□□□□□ -0.16
PTPN7-209ENST00000477554 RBM14Q96PK6 669 aaKnown RBP14.05□□□□□ -0.16
PTPN7-209ENST00000477554 PITPNC1Q9UKF7 332 aa14.05□□□□□ -0.16
PTPN7-209ENST00000477554 IGHV1-3A0A0C4DH29 117 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 NAP1L6A6NFF2 107 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 PMP2P02689 132 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 IFNA6P05013 189 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 CEACAM3P40198 252 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 HTD2P86397 168 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 IFITM3Q01628 133 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 HERPUD1Q15011 391 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 VAX1Q5SQQ9 334 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 OR52M1Q8NGK5 317 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 FAM110DQ8TAY7 271 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-209ENST00000477554 CABLES2Q9BTV7 478 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 WNT10AQ9GZT5 417 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 EHFQ9NZC4 300 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 GNG12Q9UBI6 72 aa14.04□□□□□ -0.16
PTPN7-209ENST00000477554 LINC00854A0A1B0GVQ3 168 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 OR2F2O95006 317 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 IGKV1D-33P01593 117 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 IGKV1-33P01594 117 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 BRS3P32247 399 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 RFX2P48378 723 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 SLC25A48Q6ZT89 311 aaKnown RBP14.03□□□□□ -0.16
PTPN7-209ENST00000477554 OVCH2Q7RTZ1 564 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 TMEM17Q86X19 198 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 ODF3L1Q8IXM7 274 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 LINC00311Q8N616 119 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 OR4C16Q8NGL9 310 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 OR10J5Q8NHC4 309 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 IL1F10Q8WWZ1 152 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 PRSS22Q9GZN4 317 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 HRASLSQ9HDD0 168 aa14.03□□□□□ -0.16
PTPN7-209ENST00000477554 AMMECR1Q9Y4X0 333 aaPredicted RBP14.03□□□□□ -0.16
PTPN7-209ENST00000477554 ADARB2-AS1A8MUL3 147 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 DISC1C4P0D8 188 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 M0QYG6 137 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 BET1O15155 118 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 HSPA12AO43301 675 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 LYRM1O43325 122 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 OR5H8P0DN80 308 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 ZBTB25P24278 435 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 TSPAN5P62079 268 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 ASAH1Q13510 395 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 MORN2Q502X0 79 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 IGSF11Q5DX21 431 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 TCTEX1D4Q5JR98 221 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 MZT2BQ6NZ67 158 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms