RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GAB2Q9UQC2 676 aa13.1□□□□□ -0.31
VHL-203ENST00000477538 OOSP1A8MZH6 123 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 INAFM1C9JVW0 142 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 IGLV2-14P01704 120 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 GAPDHP04406 335 aaKnown RBP13.09□□□□□ -0.31
VHL-203ENST00000477538 GNRHRP30968 328 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 REG1BP48304 166 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 ZNF816Q0VGE8 651 aaPredicted RBP13.09□□□□□ -0.31
VHL-203ENST00000477538 BAMBIQ13145 260 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 MSMO1Q15800 293 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 SSX2Q16385 188 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 ZNF818PQ6ZRF7 136 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 C9orf139Q6ZV77 190 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 TGIF2LXQ8IUE1 241 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 SLC38A6Q8IZM9 456 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 BCL6BQ8N143 479 aaPredicted RBP13.09□□□□□ -0.31
VHL-203ENST00000477538 DYNAPQ8N1N2 210 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 POC5Q8NA72 575 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 RTN4IP1Q8WWV3 396 aaPredicted RBP13.09□□□□□ -0.31
VHL-203ENST00000477538 C22orf15Q8WYQ4 148 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 RSRP1Q9BUV0 290 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 FAM96BQ9Y3D0 163 aa13.09□□□□□ -0.31
VHL-203ENST00000477538 SOX21Q9Y651 276 aaPredicted RBP13.09□□□□□ -0.31
VHL-203ENST00000477538 M0R1X1 148 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 GPR31O00270 319 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 TXNL1O43396 289 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 PROP1O75360 226 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 PAX6P26367 422 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 RBMS2Q15434 407 aaKnown RBP13.08□□□□□ -0.32
VHL-203ENST00000477538 SURF2Q15527 256 aaPredicted RBP13.08□□□□□ -0.32
VHL-203ENST00000477538 CCDC144NLQ6NUI1 221 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 ZBTB34Q8NCN2 500 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 ZFAND1Q8TCF1 268 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 AKR1E2Q96JD6 320 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 SLC25A21Q9BQT8 299 aaPredicted RBP13.08□□□□□ -0.32
VHL-203ENST00000477538 DPAGT1Q9H3H5 408 aa13.08□□□□□ -0.32
VHL-203ENST00000477538 FN1P02751 2386 aaKnown RBP13.08□□□□□ -0.32
VHL-203ENST00000477538 MXRA5Q9NR99 2828 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 A0A1W2PPI3 338 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 NDUFB6O95139 128 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 FBP1P09467 338 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 SRD5A1P18405 259 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 SLC6A1P30531 599 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 PHLDA2Q53GA4 152 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 PLA1AQ53H76 456 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 CMTM1Q8IZ96 169 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 OR8H3Q8N146 312 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 BVESQ8NE79 360 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 ZNF486Q96H40 463 aaPredicted RBP13.07□□□□□ -0.32
VHL-203ENST00000477538 SCGB3A2Q96PL1 93 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 MRPL20Q9BYC9 149 aaKnown RBP13.07□□□□□ -0.32
VHL-203ENST00000477538 C14orf166Q9Y224 244 aaKnown RBP13.07□□□□□ -0.32
VHL-203ENST00000477538 VSIG4Q9Y279 399 aa13.07□□□□□ -0.32
VHL-203ENST00000477538 IGHV1-3A0A0C4DH29 117 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 MDFIC2A0A1B0GVS7 189 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 FAM240BA0A1B0GVZ2 78 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 TNFSF12O43508 249 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 CTSDP07339 412 aaPredicted RBP13.06□□□□□ -0.32
VHL-203ENST00000477538 PI3P19957 117 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 S100GP29377 79 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 SCGB2A2Q13296 93 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 DEFB112Q30KQ8 113 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 ABCA11PQ4W5N1 156 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 ZDHHC22Q8N966 263 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 DRAXINQ8NBI3 349 aaPredicted RBP13.06□□□□□ -0.32
VHL-203ENST00000477538 ENKURQ8TC29 256 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 GPHA2Q96T91 129 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 NABP2Q9BQ15 211 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 SLC2A9Q9NRM0 540 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 GPR132Q9UNW8 380 aa13.06□□□□□ -0.32
VHL-203ENST00000477538 TEP1Q99973 2627 aaKnown RBP13.05□□□□□ -0.32
VHL-203ENST00000477538 TIMM23O14925 209 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 TCRBP04435 133 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 CT45A6P0DMU7 189 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 CT45A5P0DMU8 189 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 CT45A7P0DMV0 189 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 DUTP33316 252 aaKnown RBP13.05□□□□□ -0.32
VHL-203ENST00000477538 THBS3P49746 956 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 ARHGDIBP52566 201 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 EIF4EBP1Q13541 118 aaPredicted RBP13.05□□□□□ -0.32
VHL-203ENST00000477538 MOB3BQ86TA1 216 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 ADTRPQ96IZ2 230 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 HSD17B10Q99714 261 aaKnown RBP13.05□□□□□ -0.32
VHL-203ENST00000477538 MEGF9Q9H1U4 602 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 C5orf66Q9H5L9 145 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 COPZ2Q9P299 210 aa13.05□□□□□ -0.32
VHL-203ENST00000477538 LINC00473A8K010 186 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 PGLYRP1O75594 196 aaPredicted RBP13.04□□□□□ -0.32
VHL-203ENST00000477538 RLN1P04808 185 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 PIGPP57054 158 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 LINC00205P59089 165 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 RND3P61587 244 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 CATR1Q13166 79 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 GLDNQ6ZMI3 551 aaPredicted RBP13.04□□□□□ -0.32
VHL-203ENST00000477538 ZNF66Q6ZN08 573 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 NRARPQ7Z6K4 114 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 CCDC71LQ8N9Z2 235 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 ZNF383Q8NA42 475 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 TCTEX1D2Q8WW35 142 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms