RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ZNF90Q03938 601 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 TMEM241Q24JQ0 296 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 ACSM6Q6P461 480 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 LHFPL1Q86WI0 220 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 FAM210BQ96KR6 192 aa9.38□□□□□ -0.91
COL27A1-204ENST00000477421 C1orf147Q96MC9 270 aaPredicted RBP9.38□□□□□ -0.91
COL27A1-204ENST00000477421 ZNF106Q9H2Y7 1883 aaKnown RBP9.37□□□□□ -0.91
COL27A1-204ENST00000477421 PRSS44E7EML9 344 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 ZG16O60844 167 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 S1PR2O95136 353 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 PF4V1P10720 104 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 IGHV1-2P23083 117 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 B3GALT5-AS1P59052 145 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 RSPO1Q2MKA7 263 aaPredicted RBP9.37□□□□□ -0.91
COL27A1-204ENST00000477421 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 BAGE2Q86Y30 109 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 FAM169BQ8N8A8 192 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 OR8G5Q8NG78 346 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 TMEM147Q9BVK8 224 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 TPPP3Q9BW30 176 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 LINC00470Q9BZP3 86 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 LYRM2Q9NU23 88 aaPredicted RBP9.37□□□□□ -0.91
COL27A1-204ENST00000477421 NOTCH2Q04721 2471 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 NCOR2Q9Y618 2525 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 CECR9P0C854 216 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 HLA-GP17693 338 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 GFRA1P56159 465 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 SLC35E1Q96K37 410 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 IL36GQ9NZH8 169 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 PRR33A8MZF0 331 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 PITX3O75364 302 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 DANCRP0C864 163 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 COX7A1P24310 79 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 HOXA4Q00056 320 aaPredicted RBP9.37□□□□□ -0.91
COL27A1-204ENST00000477421 PLPPR1Q8TBJ4 325 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 TMEM45BQ96B21 275 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 RHOVQ96L33 236 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 RPRMQ9NS64 109 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 ZNF355PQ9NSJ1 428 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 OR6C3Q9NZP0 311 aa9.37□□□□□ -0.91
COL27A1-204ENST00000477421 PQLC2LA1A4F0 135 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 GYPAP02724 150 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 BCL2L2Q92843 193 aaPredicted RBP9.36□□□□□ -0.91
COL27A1-204ENST00000477421 WDYHV1Q96HA8 205 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 TMPRSS5Q9H3S3 457 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 GAR1Q9NY12 217 aaKnown RBP9.36□□□□□ -0.91
COL27A1-204ENST00000477421 C12orf77C9JDV5 145 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 PHOX2AO14813 284 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 NDUFB3O43676 98 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 SMPD2O60906 423 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 MMP7P09237 267 aaPredicted RBP9.36□□□□□ -0.91
COL27A1-204ENST00000477421 COX5BP10606 129 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 EGR1P18146 543 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 WNT5AP41221 380 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 ERHP84090 104 aaKnown RBP9.36□□□□□ -0.91
COL27A1-204ENST00000477421 DEFA6Q01524 100 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 Q6ZT83 130 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 MOB3BQ86TA1 216 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 ZCCHC24Q8N2G6 241 aaKnown RBP9.36□□□□□ -0.91
COL27A1-204ENST00000477421 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 OR5D13Q8NGL4 314 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 HSD17B10Q99714 261 aaKnown RBP9.36□□□□□ -0.91
COL27A1-204ENST00000477421 SLC35D1Q9NTN3 355 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 SPRR3Q9UBC9 169 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 F6UZH7 168 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
COL27A1-204ENST00000477421 YIF1AO95070 293 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 OTX1P32242 354 aaPredicted RBP9.36□□□□□ -0.91
COL27A1-204ENST00000477421 FAM27E3Q08E93 113 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 GLRX5Q86SX6 157 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 LOXL4Q96JB6 756 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 SNX22Q96L94 193 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 DMRTA2Q96SC8 542 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 PKIBQ9C010 78 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 TOLLIPQ9H0E2 274 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 KIAA1456Q9P272 454 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 PTPRQQ9UMZ3 2332 aa9.36□□□□□ -0.91
COL27A1-204ENST00000477421 TRAV24A0A0B4J272 114 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A10PA6NDY2 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A18PA6NE21 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A16PA6NEW6 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A20PA6NIJ5 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A8PA6NJQ4 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A7PA6NKC0 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A22PA8MWA6 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A12PA8MX19 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A5PA8MXJ8 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A23PA8MXZ1 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 B9A039 149 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 TSTD3H0UI37 97 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A15PP0C7V4 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A13PP0C7W8 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A14PP0C7W9 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 FAM90A24PP0C7X0 464 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 UCP3P55916 312 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 BSXQ3C1V8 233 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 C9orf106Q8NAJ2 232 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 ZDHHC16Q969W1 377 aa9.35□□□□□ -0.91
COL27A1-204ENST00000477421 REG4Q9BYZ8 158 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms