RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 AADACP22760 399 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 EWSR1Q01844 656 aaKnown RBP eCLIP8.55□□□□□ -1.04
BRCA1-213ENST00000476777 RIPK1Q13546 671 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 RPEL1Q2QD12 228 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 DNAL1Q4LDG9 190 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 C6orf141Q5SZD1 244 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 XAF1Q6GPH4 301 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 CEMP1Q6PRD7 247 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-213ENST00000476777 GLIPR1L1Q6UWM5 242 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 GATAD1Q8WUU5 269 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 TINAGL1Q9GZM7 467 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-213ENST00000476777 PARP12Q9H0J9 701 aaKnown RBP8.55□□□□□ -1.04
BRCA1-213ENST00000476777 BANF2Q9H503 90 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 OAZ3Q9UMX2 235 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 SNTNA6NMZ2 147 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 GYG2O15488 501 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 AIREO43918 545 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 RBMXL2O75526 392 aaKnown RBP8.54□□□□□ -1.04
BRCA1-213ENST00000476777 GPX5O75715 221 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 SPDEFO95238 335 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 IGKV1-16P04430 117 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 HMGN3Q15651 99 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 BVESQ8NE79 360 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 MUL1Q969V5 352 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 ABHD14BQ96IU4 210 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 USMG5Q96IX5 58 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 Q96M66 194 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 OR14A2Q96R54 314 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 AGMATQ9BSE5 352 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 SELENOIQ9C0D9 397 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 PEMTQ9UBM1 199 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 STEAP1Q9UHE8 339 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 LRRC42Q9Y546 428 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 DNAH6Q9C0G6 4158 aa8.54□□□□□ -1.04
BRCA1-213ENST00000476777 BAG2O95816 211 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 MGMTP16455 207 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 GABRB1P18505 474 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 DEFB114Q30KQ6 69 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 RPL22L1Q6P5R6 122 aaKnown RBP8.53□□□□□ -1.04
BRCA1-213ENST00000476777 DRAXINQ8NBI3 349 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-213ENST00000476777 IL1F10Q8WWZ1 152 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 SNAPC3Q92966 411 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 TMEM68Q96MH6 324 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 TSNAXQ99598 290 aaKnown RBP8.53□□□□□ -1.04
BRCA1-213ENST00000476777 AMBNQ9NP70 447 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 ZC4H2Q9NQZ6 224 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 AP4S1Q9Y587 144 aa8.53□□□□□ -1.04
BRCA1-213ENST00000476777 TRAV8-7A0A075B6U6 113 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 A0A0B4J203 849 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 A0A0J9YWU9 116 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 H3BNX3 289 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 BMPR1BO00238 502 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 PDCD6O75340 191 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 PROP1O75360 226 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 LIMS3P0CW19 117 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 LIMS4P0CW20 117 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 CPEP16870 476 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 LINC00205P59089 165 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 RPS16P62249 146 aaKnown RBP8.52□□□□□ -1.05
BRCA1-213ENST00000476777 PJVKQ0ZLH3 352 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 GUCA2BQ16661 112 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 CCDC58Q4VC31 144 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 AWAT2Q6E213 333 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 JAGN1Q8N5M9 183 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 CCDC197Q8NCU1 140 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 OR13C5Q8NGS8 318 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 SLC7A6OSQ96CW6 309 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-213ENST00000476777 CENPNQ96H22 339 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-213ENST00000476777 ABRACLQ9P1F3 81 aa8.52□□□□□ -1.05
BRCA1-213ENST00000476777 KLK5Q9Y337 293 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-213ENST00000476777 ABCA13Q86UQ4 5058 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 TRBV5-5A0A0J9YX44 114 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 SAC3D1A6NKF1 404 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 ITGB1BP1O14713 200 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 CRTAPO75718 401 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-213ENST00000476777 IGLV2-23P01705 113 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 ALPLP05186 524 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 CRYGBP07316 175 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 FCGR1AP12314 374 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 KIR2DS2P43631 304 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 LGALS7P47929 136 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 TNFRSF9Q07011 255 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 LGALS9CQ6DKI2 356 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 WFDC3Q8IUB2 231 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 ZNF383Q8NA42 475 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 OR52I1Q8NGK6 324 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 DYNLRB2Q8TF09 96 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 WDR89Q96FK6 387 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-213ENST00000476777 SULT4A1Q9BR01 284 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 GGTLC1Q9BX51 225 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 COA4Q9NYJ1 87 aa8.51□□□□□ -1.05
BRCA1-213ENST00000476777 C2orf70A6NJV1 201 aa8.5□□□□□ -1.05
BRCA1-213ENST00000476777 EDN2P20800 178 aa8.5□□□□□ -1.05
BRCA1-213ENST00000476777 CAPGP40121 348 aa8.5□□□□□ -1.05
BRCA1-213ENST00000476777 ZIK1Q3SY52 487 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-213ENST00000476777 LYG2Q86SG7 212 aa8.5□□□□□ -1.05
BRCA1-213ENST00000476777 PDPNQ86YL7 162 aa8.5□□□□□ -1.05
BRCA1-213ENST00000476777 SVOPQ8N4V2 548 aa8.5□□□□□ -1.05
BRCA1-213ENST00000476777 ADAD2Q8NCV1 583 aaKnown RBP8.5□□□□□ -1.05
BRCA1-213ENST00000476777 FAM46BQ96A09 425 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms