RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 APOBEC3DQ96AK3 386 aaPredicted RBP4.13□□□□□ -1.75
NUP58-209ENST00000476553 GPR146Q96CH1 333 aa4.13□□□□□ -1.75
NUP58-209ENST00000476553 L3HYPDHQ96EM0 354 aa4.13□□□□□ -1.75
NUP58-209ENST00000476553 CAPZA3Q96KX2 299 aa4.13□□□□□ -1.75
NUP58-209ENST00000476553 TSPAN32Q96QS1 320 aa4.13□□□□□ -1.75
NUP58-209ENST00000476553 PLEKHF2Q9H8W4 249 aa4.13□□□□□ -1.75
NUP58-209ENST00000476553 ITGB4P16144 1822 aa4.13□□□□□ -1.75
NUP58-209ENST00000476553 BICRAQ9NZM4 1560 aa4.13□□□□□ -1.75
NUP58-209ENST00000476553 PTPRJQ12913 1337 aa4.13□□□□□ -1.75
NUP58-209ENST00000476553 MYH2Q9UKX2 1941 aa4.13□□□□□ -1.75
NUP58-209ENST00000476553 NOS1P29475 1434 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 HECW2Q9P2P5 1572 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 GON4LQ3T8J9 2241 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 SIGLEC16A6NMB1 481 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 MRASO14807 208 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 NDUFC2O95298 119 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 LGALS1P09382 135 aaKnown RBP4.12□□□□□ -1.75
NUP58-209ENST00000476553 CPMP14384 443 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 CA5AP35218 305 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 INPP1P49441 399 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 DIO3P55073 304 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 RPS20P60866 119 aaKnown RBP4.12□□□□□ -1.75
NUP58-209ENST00000476553 RAP1AP62834 184 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 HERVK_113P63121 156 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 C12orf74Q32Q52 190 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 PLPPR5Q32ZL2 321 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 IBA57Q5T440 356 aaKnown RBP4.12□□□□□ -1.75
NUP58-209ENST00000476553 CEMP1Q6PRD7 247 aaPredicted RBP4.12□□□□□ -1.75
NUP58-209ENST00000476553 TCF24Q7RTU0 167 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 GTSCR1Q86UQ5 136 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 ZNF429Q86V71 674 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 OR2T27Q8NH04 317 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 ZNF675Q8TD23 568 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 DNAJC9Q8WXX5 260 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 KLK6Q92876 244 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 SERPINI1Q99574 410 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 TBL1XR1Q9BZK7 514 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 CHST6Q9GZX3 395 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 ZNF331Q9NQX6 463 aaPredicted RBP4.12□□□□□ -1.75
NUP58-209ENST00000476553 ZNF581Q9P0T4 197 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 ANAPC10Q9UM13 185 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 ZNF706Q9Y5V0 76 aaPredicted RBP4.12□□□□□ -1.75
NUP58-209ENST00000476553 CCDC171Q6TFL3 1326 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 TONSLQ96HA7 1378 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 ATRNO75882 1429 aa4.12□□□□□ -1.75
NUP58-209ENST00000476553 MIA3Q5JRA6 1907 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 A0A087WX48 190 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 TMEM72A0PK05 275 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 AIPO00170 330 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 DEGS1O15121 323 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 IGLV2-23P01705 113 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 C8GP07360 202 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 PSMD8P48556 350 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 DSCR10P59022 87 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 FABP9Q0Z7S8 132 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 CGB2Q6NT52 195 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 IDO2Q6ZQW0 420 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 YIPF7Q8N8F6 280 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 ZNF615Q8N8J6 731 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 LINC01555Q8NAE3 123 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 OR9Q1Q8NGQ5 310 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 OR1L1Q8NH94 360 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 GTSF1Q8WW33 167 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 GALMQ96C23 342 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 REEP6Q96HR9 211 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 CCDC115Q96NT0 180 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 LYSMD1Q96S90 227 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 VPS25Q9BRG1 176 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 GTSF1LQ9H1H1 148 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 COPZ2Q9P299 210 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 DHCR7Q9UBM7 475 aaKnown RBP4.11□□□□□ -1.75
NUP58-209ENST00000476553 ROBO3Q96MS0 1386 aa4.11□□□□□ -1.75
NUP58-209ENST00000476553 DENND4BO75064 1496 aaPredicted RBP4.11□□□□□ -1.75
NUP58-209ENST00000476553 TMED7-TICAM2A0A0A6YYA0 188 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 C5orf63A6NC05 138 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 ATP6V1G2-DDX39BF2Z307 99 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 TRAPPC2LH3BP13 241 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 TMX2-CTNND1H3BSU7 103 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 CHST10O43529 356 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 EIF1BO60739 113 aaKnown RBP4.1□□□□□ -1.75
NUP58-209ENST00000476553 SRSF10O75494 262 aaKnown RBP4.1□□□□□ -1.75
NUP58-209ENST00000476553 PSG2P11465 335 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 ORM2P19652 201 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 OR10J1P30954 320 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 EIF1P41567 113 aaKnown RBP4.1□□□□□ -1.75
NUP58-209ENST00000476553 SERPINB10P48595 397 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 DEFA1P59665 94 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 ELOCQ15369 112 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 TIMM50Q3ZCQ8 353 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 SPINK14Q6IE38 97 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 FA2HQ7L5A8 372 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 LRRC28Q86X40 367 aaPredicted RBP4.1□□□□□ -1.75
NUP58-209ENST00000476553 ZNF645Q8N7E2 425 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 ZNF555Q8NEP9 628 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 OR2M3Q8NG83 312 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 MBD3L1Q8WWY6 194 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 DCUN1D4Q92564 292 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 FRZBQ92765 325 aa4.1□□□□□ -1.75
NUP58-209ENST00000476553 PLEKHB2Q96CS7 222 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms