RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 E7EQ34 232 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 H7C2Y5 167 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 LIN7AO14910 233 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-211ENST00000476215 OR1I1O60431 355 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 TRAPPC6AO75865 159 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 OR2B3O76000 313 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 KCNK2O95069 426 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 UGT2B7P16662 529 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 CD9P21926 228 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 IVDP26440 423 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 GNRHRP30968 328 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 GABRA4P48169 554 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 MLF1P58340 268 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 DCDP81605 110 aaKnown RBP2.3□□□□□ -2.04
PTCD3-211ENST00000476215 POU6F1Q14863 301 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 PMVKQ15126 192 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 ATP6V1FQ16864 119 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 TTC32Q5I0X7 151 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 EPGNQ6UW88 154 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 FA2HQ7L5A8 372 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 SYCE1Q8N0S2 351 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 UBL4BQ8N7F7 174 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 OR52K1Q8NGK4 314 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 OR4C13Q8NGP0 309 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 ZFAND1Q8TCF1 268 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 C1orf54Q8WWF1 131 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 ITLN2Q8WWU7 325 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-211ENST00000476215 C19orf60Q96EN9 201 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 RNF170Q96K19 258 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 TSNAXQ99598 290 aaKnown RBP2.3□□□□□ -2.04
PTCD3-211ENST00000476215 MRPL20Q9BYC9 149 aaKnown RBP2.3□□□□□ -2.04
PTCD3-211ENST00000476215 VSIRQ9H7M9 311 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 FAM60AQ9NP50 221 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 EURLQ9NYK6 297 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 CFL2Q9Y281 166 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 R4GN34 69 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 PRR14LQ5THK1 2151 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 HIVEP3Q5T1R4 2406 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 OTOGQ6ZRI0 2925 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 PDZD2O15018 2839 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 MDC1Q14676 2089 aaKnown RBP2.29□□□□□ -2.04
PTCD3-211ENST00000476215 AKAP9Q99996 3911 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 A0A0J9YY10 115 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 OR51F1A6NGY5 319 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 IQCF5A8MTL0 148 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 C9J4A7 227 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 ETHE1O95571 254 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 CXorf1O96002 111 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 CDK1P06493 297 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 PRKACAP17612 351 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 MSNP26038 577 aaKnown RBP2.29□□□□□ -2.04
PTCD3-211ENST00000476215 PEBP1P30086 187 aaKnown RBP2.29□□□□□ -2.04
PTCD3-211ENST00000476215 CCR7P32248 378 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 RPL22P35268 128 aaKnown RBP2.29□□□□□ -2.04
PTCD3-211ENST00000476215 TTPAP49638 278 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 FMODQ06828 376 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 CDNFQ49AH0 187 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 NKAIN1Q4KMZ8 207 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 C4orf22Q6V702 233 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 SLC13A5Q86YT5 568 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-211ENST00000476215 KRTAP13-1Q8IUC0 172 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 C2orf73Q8N5S3 287 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-211ENST00000476215 ZDHHC22Q8N966 263 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 DNAAF3Q8N9W5 541 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 FDCSPQ8NFU4 85 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 OR2Y1Q8NGV0 311 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 OR51A7Q8NH64 312 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 NDNFQ8TB73 568 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 YIPF5Q969M3 257 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 BIRC8Q96P09 236 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 OR2V2Q96R30 315 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 KIFC1Q9BW19 673 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 PLA2G12AQ9BZM1 189 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 ABCB9Q9NP78 766 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 GUCA1BQ9UMX6 200 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 VPS13CQ709C8 3753 aa2.29□□□□□ -2.04
PTCD3-211ENST00000476215 MTORP42345 2549 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 ADGRG4Q8IZF6 3080 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 FAM240AA0A1B0GVK7 77 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 PRMT5O14744 637 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-211ENST00000476215 VAPBO95292 243 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 IGHG2P01859 326 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 MBP02144 154 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 OR5AL1P0C617 328 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 RPS3P23396 243 aaKnown RBP eCLIP2.28□□□□□ -2.04
PTCD3-211ENST00000476215 NUDT2P50583 147 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 TAS2R60P59551 318 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 RELAQ04206 551 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 PRDX1Q06830 199 aaKnown RBP2.28□□□□□ -2.04
PTCD3-211ENST00000476215 DEFB110Q30KQ9 67 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 CCSMST1Q4G0I0 132 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 ACSBG2Q5FVE4 666 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 LDLRAD2Q5SZI1 272 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 FAM27D1Q5T7N8 215 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 DUPD1Q68J44 220 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 PTRHD1Q6GMV3 140 aaKnown RBP2.28□□□□□ -2.04
PTCD3-211ENST00000476215 CLEC19AQ6UXS0 136 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 CYHR1Q6ZMK1 362 aa2.28□□□□□ -2.04
PTCD3-211ENST00000476215 Q6ZS92 163 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms