RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 ABHD14BQ96IU4 210 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 KCNJ16Q9NPI9 418 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 LYRM2Q9NU23 88 aaPredicted RBP13.45□□□□□ -0.26
VARS2-207ENST00000476162 IGHV2OR16-5A0A0B4J2B6 119 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 C1QL1O75973 258 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 CEACAM1P13688 526 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 KITLGP21583 273 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 EPHA1P21709 976 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 FGF7P21781 194 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 CD200P41217 278 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 JOSD1Q15040 202 aaPredicted RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 P2RY6Q15077 328 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 ELOBQ15370 118 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 IZUMO4Q1ZYL8 232 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 ZNF718Q3SXZ3 478 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 BHLHA15Q7RTS1 189 aaPredicted RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 Q8WTZ3 238 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 GPR146Q96CH1 333 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 PACRGQ96M98 296 aaPredicted RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 KCNS2Q9ULS6 477 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 KIAA2026Q5HYC2 2103 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 ZFHX2Q9C0A1 2572 aaPredicted RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 MBD3L4A6NDZ8 208 aaPredicted RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 MBD3L3A6NE82 208 aaPredicted RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 MBD3L5A6NJ08 208 aaPredicted RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 C1QTNF9BB2RNN3 333 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 TM4SF5O14894 197 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 CHST1O43916 411 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 CRYABP02511 175 aaKnown RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 TFF1P04155 84 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 ZNF25P17030 456 aaPredicted RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 IGFL3Q6UXB1 125 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 PRSS33Q8NF86 280 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 OR13D1Q8NGV5 346 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 MBD3L2Q8NHZ7 208 aaPredicted RBP13.44□□□□□ -0.26
VARS2-207ENST00000476162 SLC25A31Q9H0C2 315 aa13.44□□□□□ -0.26
VARS2-207ENST00000476162 LMO1P25800 156 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 GCH1P30793 250 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 ZNF616Q08AN1 781 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 HNF4GQ14541 408 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 WDR82Q6UXN9 313 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 ODF3L1Q8IXM7 274 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 TMEM171Q8WVE6 324 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 HIST1H2BLQ99880 126 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 RNF115Q9Y4L5 304 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 SMCO3A2RU48 225 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 ZNF727A8MUV8 499 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 PITX3O75364 302 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 CST7O76096 145 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 IGKV1-39P01597 117 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 IGKV1D-39P04432 117 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 TUBG1P23258 451 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 AESQ08117 197 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 RTP5Q14D33 572 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 AKR1C8PQ5T2L2 129 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 ACP7Q6ZNF0 438 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 SNHG12Q9BXW3 62 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 TUBG2Q9NRH3 451 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 LUZP4Q9P127 313 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 RFNGQ9Y644 331 aa13.43□□□□□ -0.26
VARS2-207ENST00000476162 TMEM30CPA0ZSE6 113 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 DVL1O14640 695 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 PRH1P02810 166 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 TRGC2P03986 189 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 WNT2P09544 360 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 OR13C7P0DN81 318 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 GZMBP10144 247 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 ZNF16P17020 682 aaPredicted RBP13.42□□□□□ -0.26
VARS2-207ENST00000476162 OR3A1P47881 315 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 CAMLGP49069 296 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 ZNF266Q14584 549 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 ZNF343Q6P1L6 599 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 Q6ZRM9 215 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 RPRMLQ8N4K4 120 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 TMEM217Q8N7C4 229 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 OR5C1Q8NGR4 320 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 OR1L1Q8NH94 360 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 ABHD5Q8WTS1 349 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 KCNIP1Q9NZI2 227 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 GOLT1BQ9Y3E0 138 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 PUS1Q9Y606 427 aaKnown RBP eCLIP13.42□□□□□ -0.26
VARS2-207ENST00000476162 SLC25A15Q9Y619 301 aa13.42□□□□□ -0.26
VARS2-207ENST00000476162 A0A1B0GU03 582 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 MED19A0JLT2 244 aaPredicted RBP13.41□□□□□ -0.26
VARS2-207ENST00000476162 MMP9P14780 707 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 PAX9P55771 341 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 MBNL2Q5VZF2 373 aaKnown RBP13.41□□□□□ -0.26
VARS2-207ENST00000476162 DRAM1Q8N682 238 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 MGAQ8IWI9 3026 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 C12orf77C9JDV5 145 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 K7EM74 188 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 DLEU1O43261 78 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 TRGC1P0CF51 173 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 DYNLT3P51808 116 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 ERVFRD-1P60508 538 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 ZNF585BQ52M93 769 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 FAM53AQ6NSI3 398 aaPredicted RBP13.41□□□□□ -0.26
VARS2-207ENST00000476162 TMEM182Q6ZP80 229 aaPredicted RBP13.41□□□□□ -0.26
VARS2-207ENST00000476162 Q6ZS92 163 aa13.41□□□□□ -0.26
VARS2-207ENST00000476162 HEATR1Q9H583 2144 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms