RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 HIST2H2BCQ6DN03 193 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 SPNS3Q6ZMD2 512 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 MRGPRGQ86SM5 289 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 TMEM178AQ8NBL3 297 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 OR10D3Q8NH80 312 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 PIGCQ92535 297 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 PINX1Q96BK5 328 aaKnown RBP5.78□□□□□ -1.48
UBR4-212ENST00000475973 CCDC140Q96MF4 163 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 DIRC2Q96SL1 478 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 SPENQ96T58 3664 aaKnown RBP5.78□□□□□ -1.48
UBR4-212ENST00000475973 C20orf24Q9BUV8 137 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 SSBP4Q9BWG4 385 aaPredicted RBP5.78□□□□□ -1.48
UBR4-212ENST00000475973 ZNF442Q9H7R0 627 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 SRD5A3Q9H8P0 318 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 DEPPQ9NTK1 212 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 GAR1Q9NY12 217 aaKnown RBP5.78□□□□□ -1.48
UBR4-212ENST00000475973 UBE2J1Q9Y385 318 aaPredicted RBP5.78□□□□□ -1.48
UBR4-212ENST00000475973 MPC1Q9Y5U8 109 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 RTTNQ86VV8 2226 aa5.78□□□□□ -1.48
UBR4-212ENST00000475973 COL12A1Q99715 3063 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 EML6Q6ZMW3 1958 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 A0A1B0GWJ7 208 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZNF503-AS2A6NEH8 195 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZNF727A8MUV8 499 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 CLDN34H7C241 214 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZG16O60844 167 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 OR7C1O76099 320 aaPredicted RBP5.77□□□□□ -1.49
UBR4-212ENST00000475973 YIF1AO95070 293 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 PTBP3O95758 552 aaKnown RBP5.77□□□□□ -1.49
UBR4-212ENST00000475973 IFNA10P01566 189 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 SOD3P08294 240 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 PATE4P0C8F1 98 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 CBR1P16152 277 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 HOXC12P31275 282 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 GPX4P36969 197 aaPredicted RBP5.77□□□□□ -1.49
UBR4-212ENST00000475973 MDH2P40926 338 aaKnown RBP5.77□□□□□ -1.49
UBR4-212ENST00000475973 LHX2P50458 406 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 TDGF1P3P51864 188 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 CLDN18P56856 261 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 OR2B8PP59922 312 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 RAB2AP61019 212 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 RUNX1Q01196 453 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZNF154Q13106 437 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZNF146Q15072 292 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 OR1C1Q15619 314 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZNF343Q6P1L6 599 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZNF600Q6ZNG1 722 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZNF497Q6ZNH5 498 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 CYP2G1PQ6ZSU1 146 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 MOB1BQ7L9L4 216 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 SSX7Q7RTT5 188 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 C5orf24Q7Z6I8 188 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 THNSL2Q86YJ6 484 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZDHHC23Q8IYP9 409 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 CMTM1Q8IZ96 169 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 Q8N7P7 452 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZFP62Q8NB50 900 aaPredicted RBP5.77□□□□□ -1.49
UBR4-212ENST00000475973 ZBTB34Q8NCN2 500 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 OR56B2PQ8NGI1 322 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 OR5R1Q8NH85 324 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 CD300LFQ8TDQ1 290 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 NIPSNAP3BQ9BS92 247 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 WDR61Q9GZS3 305 aaKnown RBP5.77□□□□□ -1.49
UBR4-212ENST00000475973 OR51I2Q9H344 312 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 GFOD1Q9NXC2 390 aa5.77□□□□□ -1.49
UBR4-212ENST00000475973 PUS1Q9Y606 427 aaKnown RBP eCLIP5.77□□□□□ -1.49
UBR4-212ENST00000475973 RELNP78509 3460 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 PINLYPA6NC86 204 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 CD300LBA8K4G0 201 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 DVL1O14640 695 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 SYNGR2O43760 224 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 SSSCA1O60232 199 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 CST7O76096 145 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 TRGC1P0CF51 173 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 GLI4P10075 376 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 ARR3P36575 388 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 RPS10P46783 165 aaKnown RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 ASCL1P50553 236 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 RPL23AP62750 156 aaKnown RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 ARF1P84077 181 aaKnown RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 JOSD1Q15040 202 aaPredicted RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 ATP6V1FQ16864 119 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 PDLIM3Q53GG5 364 aaPredicted RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 KRTCAP3Q53RY4 240 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 NCMAPQ5T1S8 102 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 AKR1C8PQ5T2L2 129 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 MEX3BQ6ZN04 569 aaKnown RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 C22orf34Q6ZV56 151 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 YRDCQ86U90 279 aaKnown RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 ZNF573Q86YE8 665 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 ZNF808Q8N4W9 903 aaPredicted RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 TCTEX1D1Q8N7M0 179 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 MDS2Q8NDY4 140 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 OR10V1Q8NGI7 309 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 FAM216AQ8WUB2 273 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 FRZBQ92765 325 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 FAM210BQ96KR6 192 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 ALKBH3Q96Q83 286 aaPredicted RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 TAAR6Q96RI8 345 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 ACTR3CQ9C0K3 210 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms