RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 FLVCR2Q9UPI3 526 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 VSIG4Q9Y279 399 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 PRELID3BQ9Y3B1 194 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 TMED3Q9Y3Q3 217 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 KPTNQ9Y664 436 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 ALG5Q9Y673 324 aa5.78□□□□□ -1.48
SHQ1-207ENST00000475558 IGKV1-6A0A0C4DH72 117 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 C3orf85A0A1B0GTC6 90 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 CRYM-AS1A6NIL9 109 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 A8MXK9 166 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 PGLYRP1O75594 196 aaPredicted RBP5.77□□□□□ -1.49
SHQ1-207ENST00000475558 HLA-AP01891 365 aaKnown RBP5.77□□□□□ -1.49
SHQ1-207ENST00000475558 SERPINE2P07093 398 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 OR8U9P0C7N5 309 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 ANXA7P20073 488 aaKnown RBP5.77□□□□□ -1.49
SHQ1-207ENST00000475558 HNF1AP20823 631 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 C4BPBP20851 252 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 EPHA1P21709 976 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 CD34P28906 385 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 MC5RP33032 325 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 GZMKP49863 264 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 LOXL3P58215 753 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 FXYD4P59646 89 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 RAP2BP61225 183 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 DHRS2Q13268 280 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 HERPUD1Q15011 391 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 CARTPTQ16568 116 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 FAAP20Q6NZ36 180 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 LYPD2Q6UXB3 125 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 BTNL3Q6UXE8 466 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 LDLRAD3Q86YD5 345 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 PRR18Q8N4B5 295 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 TEX29Q8N6K0 151 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 OR8U1Q8NH10 309 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 OR9G1Q8NH87 305 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 OR1L1Q8NH94 360 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 C10orf105Q8TEF2 133 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 SECTM1Q8WVN6 248 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 TOMM40LQ969M1 308 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 TMEM56Q96MV1 263 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 SPIN2AQ99865 258 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 SPIN2BQ9BPZ2 258 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 NAA60Q9H7X0 242 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 UNKLQ9H9P5 680 aaKnown RBP5.77□□□□□ -1.49
SHQ1-207ENST00000475558 SLC2A9Q9NRM0 540 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 LIN7CQ9NUP9 197 aaKnown RBP5.77□□□□□ -1.49
SHQ1-207ENST00000475558 AMMECR1Q9Y4X0 333 aaPredicted RBP5.77□□□□□ -1.49
SHQ1-207ENST00000475558 SESN1Q9Y6P5 492 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 TMEM56-RWDD3S4R434 201 aa5.77□□□□□ -1.49
SHQ1-207ENST00000475558 OOSP1A8MZH6 123 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 LYNX1G3V0Z9 82 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 H0Y980 276 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 RBFOX2O43251 390 aaKnown RBP eCLIP5.76□□□□□ -1.49
SHQ1-207ENST00000475558 TXNL1O43396 289 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 OR2A4O95047 310 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 CDS2O95674 445 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 IGHV2-5P01817 119 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 RLN2P04090 185 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 GIPP09681 153 aaPredicted RBP5.76□□□□□ -1.49
SHQ1-207ENST00000475558 SULT1A3P0DMM9 295 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 SULT1A4P0DMN0 295 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 IGHV4-31P0DP07 118 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 LYNX1P0DP58 116 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 SLC25A6P12236 298 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 USF1P22415 310 aaPredicted RBP5.76□□□□□ -1.49
SHQ1-207ENST00000475558 PRTN3P24158 256 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 F2RP25116 425 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 CEACAM3P40198 252 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 GPR12P47775 334 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 THBS3P49746 956 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 BPIFB3P59826 476 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 SRSF4Q08170 494 aaKnown RBP5.76□□□□□ -1.49
SHQ1-207ENST00000475558 PPP1R1AQ13522 171 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 NCR3LG1Q68D85 454 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 GSG1LQ6UXU4 331 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 ZNF695Q8IW36 515 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 FAM219AQ8IW50 185 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 TCTE3Q8IZS6 198 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 ABHD12Q8N2K0 398 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 BEND2Q8NDZ0 799 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 OR52L2PQ8NGH6 319 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 RFESDQ8TAC1 157 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 ABHD14BQ96IU4 210 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 HYLS1Q96M11 299 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 OR2A7Q96R45 310 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 RNF5Q99942 180 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 AGMATQ9BSE5 352 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 PCGF1Q9BSM1 259 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 ABHD14AQ9BUJ0 271 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 TMPRSS13Q9BYE2 586 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 DCAF16Q9NXF7 216 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 COMMD9Q9P000 198 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 KCNS2Q9ULS6 477 aa5.76□□□□□ -1.49
SHQ1-207ENST00000475558 VWC2LB2RUY7 222 aa5.75□□□□□ -1.49
SHQ1-207ENST00000475558 B4DSR2 109 aa5.75□□□□□ -1.49
SHQ1-207ENST00000475558 J3QR06 171 aa5.75□□□□□ -1.49
SHQ1-207ENST00000475558 HPRT1P00492 218 aa5.75□□□□□ -1.49
SHQ1-207ENST00000475558 IGHV1-8P0DP01 117 aa5.75□□□□□ -1.49
SHQ1-207ENST00000475558 VSIG10L2P0DP72 767 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms