RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 LIAT1Q6ZQX7 453 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 SLC25A26Q70HW3 274 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 WFDC11Q8NEX6 87 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 OR11L1Q8NGX0 322 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 RNASE11Q8TAA1 199 aaKnown RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CD300LFQ8TDQ1 290 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 ERGIC1Q969X5 290 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 BSCL2Q96G97 398 aaPredicted RBP3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 KIRREL1Q96J84 757 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 SAP30LQ9HAJ7 183 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 CADP27708 2225 aa3.5□□□□□ -1.85
GAPVD1-216ENST00000474637 IGHV1-69-2A0A0G2JMI3 117 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 hCG_38984A0A1B0GV85 526 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 CD300LBA8K4G0 201 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 TAAR5O14804 337 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 SOX15O60248 233 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 JTBO76095 146 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 OR7C1O76099 320 aaPredicted RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 DIRAS3O95661 229 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 CST4P01036 141 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 SNRPCP09234 159 aaKnown RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 OR8U9P0C7N5 309 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 FUT3P21217 361 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 DTYMKP23919 212 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 CD200P41217 278 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 SULT1A1P50225 295 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 LOXL1Q08397 574 aaPredicted RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 TMEM187Q14656 261 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 Q6ZPA2 131 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF525Q8N782 197 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 OR2Z1Q8NG97 314 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 OR52M1Q8NGK5 317 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 OR8U1Q8NH10 309 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 SAT2Q96F10 170 aaPredicted RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 TIMD4Q96H15 378 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 SMIM8Q96KF7 97 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 C18orf12Q96KH6 178 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 EIF5A2Q9GZV4 153 aaKnown RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 SPACA1Q9HBV2 294 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 DOK5Q9P104 306 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 MMP24Q9Y5R2 645 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 URGCP-MRPS24S4R325 110 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 LRBAP50851 2863 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 TACC2O95359 2948 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF816-ZNF321PA0A0X1KG74 233 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 LRRC30A6NM36 301 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 NUDT19A8MXV4 375 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 VWC2LB2RUY7 222 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 TSTD3H0UI37 97 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 NDUFS7O75251 213 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 PDCD6O75340 191 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 IFNA17P01571 189 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 FABP4P15090 132 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 HIST1H1BP16401 226 aaKnown RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 USF1P22415 310 aaPredicted RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 CDX1P47902 265 aaPredicted RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 CEBPGP53567 150 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 RBM11P57052 281 aaKnown RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 EIF5AP63241 154 aaKnown RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 CCL8P80075 99 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 NHLH2Q02577 135 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 OR8G1Q15617 311 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 OR8B8Q15620 311 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 EIF5AL1Q6IS14 154 aaKnown RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 Q6ZR03 302 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 REC114Q7Z4M0 266 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 RAB1CQ92928 201 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 MSI2Q96DH6 328 aaKnown RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 GALNT14Q96FL9 552 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 GPR61Q9BZJ8 451 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 NAA60Q9H7X0 242 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 MSL2Q9HCI7 577 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 SLC2A9Q9NRM0 540 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 FBXL17Q9UF56 701 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 MPC1Q9Y5U8 109 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 NAV2Q8IVL1 2488 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 PRRC2AP48634 2157 aaKnown RBP3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 ARFGEF3Q5TH69 2177 aa3.49□□□□□ -1.85
GAPVD1-216ENST00000474637 IGHV4-30-2A0A087WSY4 118 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 ZNF727A8MUV8 499 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 E5RGE8 158 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 HSPB6O14558 160 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 PHOX2AO14813 284 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 PHF1O43189 567 aaPredicted RBP3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 FSTL3O95633 263 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 CD5P06127 495 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 OR13C7P0DN81 318 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 HOXA5P20719 270 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 BCL3P20749 454 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 AADACP22760 399 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 COL8A2P25067 703 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 DUSP1P28562 367 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 GNRHRP30968 328 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 GATA4P43694 442 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 GPR6P46095 362 aaPredicted RBP3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 FHITP49789 147 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 SULT1A2P50226 295 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 GPM6AP51674 278 aa3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 DVL1P1P54792 670 aaPredicted RBP3.48□□□□□ -1.85
GAPVD1-216ENST00000474637 RELQ04864 619 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms