RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 THOC7Q6I9Y2 204 aaKnown RBP5.14□□□□□ -1.59
CLK1-210ENST00000473565 SSX8Q7RTT4 187 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 SPAG16Q8N0X2 631 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 TMED6Q8WW62 240 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 AKR1E2Q96JD6 320 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 AQP10Q96PS8 301 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CSMD1Q96PZ7 3565 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CHD6Q8TD26 2715 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 TRGV10A0A0A0MS01 117 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 TRAV38-1A0A0B4J264 116 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 KBTBD11-OT1A0A1B0GTJ5 212 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 ANKRD34BA5PLL1 514 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 NKX6-3A6NJ46 265 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CLDN1O95832 211 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 GPR12P47775 334 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CAV2P51636 162 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 TMEM33P57088 247 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 UBA52P62987 128 aaKnown RBP5.14□□□□□ -1.59
CLK1-210ENST00000473565 HTD2P86397 168 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 PAX5Q02548 391 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 EIF4EBP1Q13541 118 aaPredicted RBP5.14□□□□□ -1.59
CLK1-210ENST00000473565 EFNB3Q15768 340 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CLLU1Q5K131 121 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 SCARB1Q8WTV0 552 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 IFI27L2Q9H2X8 130 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 PLEKHF2Q9H8W4 249 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 WFDC1Q9HC57 220 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 LIN7CQ9NUP9 197 aaKnown RBP5.14□□□□□ -1.59
CLK1-210ENST00000473565 OR6C3Q9NZP0 311 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CLN8Q9UBY8 286 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 RFNGQ9Y644 331 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CELSR1Q9NYQ6 3014 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 LEUTXA8MZ59 168 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 M0R1X1 148 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 IAPPP10997 89 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 RAB14P61106 215 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 RPL31P62899 125 aaKnown RBP5.14□□□□□ -1.59
CLK1-210ENST00000473565 TAGLNQ01995 201 aaKnown RBP5.14□□□□□ -1.59
CLK1-210ENST00000473565 SPINK9Q5DT21 86 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CT45A1Q5HYN5 189 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 COMMD7Q86VX2 200 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 VKORC1L1Q8N0U8 176 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CT45A3Q8NHU0 189 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 LRRC46Q96FV0 321 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 NARFLQ9H6Q4 476 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 NSG2Q9Y328 171 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 POMT1Q9Y6A1 747 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 POLQO75417 2590 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 CSMD2Q7Z408 3487 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 IGSF23A1L1A6 192 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 E5RGE8 158 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 F2RL2O00254 374 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 WRBO00258 174 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 DVL1O14640 695 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 CHST1O43916 411 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 FCGR3BO75015 233 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 NDUFS7O75251 213 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 FBXO24O75426 580 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 CST7O76096 145 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 RNF224P0DH78 156 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 RPS16P62249 146 aaKnown RBP5.13□□□□□ -1.59
CLK1-210ENST00000473565 CLINT1Q14677 625 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 CR1LQ2VPA4 569 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 HFEQ30201 348 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 C4orf17Q53FE4 359 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 SSX9Q7RTT3 188 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 C1orf87Q8N0U7 546 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 ZNF295-AS1Q8N0V1 137 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 BBC3Q96PG8 261 aaPredicted RBP5.13□□□□□ -1.59
CLK1-210ENST00000473565 TMEM204Q9BSN7 226 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 TOLLIPQ9H0E2 274 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 GFOD1Q9NXC2 390 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 JPT1Q9UK76 154 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 LAMP3Q9UQV4 416 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 TNCP24821 2201 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 TMEM8BA6NDV4 472 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 CDKN1AP38936 164 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 TMEM200BQ69YZ2 307 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 TRAT1Q6PIZ9 186 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 LYG1Q8N1E2 194 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 TMEM217Q8N7C4 229 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 SPIN2AQ99865 258 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 SPIN2BQ9BPZ2 258 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 ABHD14AQ9BUJ0 271 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 C11orf1Q9H5F2 150 aa5.13□□□□□ -1.59
CLK1-210ENST00000473565 SAA2-SAA4A0A096LPE2 208 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 LINC00862A6NCI5 91 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 KIAA1324LA8MWY0 1029 aaPredicted RBP5.12□□□□□ -1.59
CLK1-210ENST00000473565 NDUFB3O43676 98 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 YPEL1O60688 119 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 SAA2P0DJI9 122 aaPredicted RBP5.12□□□□□ -1.59
CLK1-210ENST00000473565 DUTP33316 252 aaKnown RBP5.12□□□□□ -1.59
CLK1-210ENST00000473565 PAX9P55771 341 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 ID3Q02535 119 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 TMEM267Q0VDI3 215 aaPredicted RBP5.12□□□□□ -1.59
CLK1-210ENST00000473565 ODF3L1Q8IXM7 274 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 EDARADDQ8WWZ3 215 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 IL22RA2Q969J5 263 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 YPEL2Q96QA6 119 aa5.12□□□□□ -1.59
CLK1-210ENST00000473565 SEBOXQ9HB31 216 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms