RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 SDHAF2Q9NX18 166 aa10.54□□□□□ -0.72
VPS13D-205ENST00000473099 RNF150Q9ULK6 438 aa10.54□□□□□ -0.72
VPS13D-205ENST00000473099 SESN1Q9Y6P5 492 aa10.54□□□□□ -0.72
VPS13D-205ENST00000473099 ANKRD17O75179 2603 aaKnown RBP10.54□□□□□ -0.72
VPS13D-205ENST00000473099 LOC105371242A0A075B767 164 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 C13orf42A0A1B0GVH6 325 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 A8MXK9 166 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 M0R1W7 72 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 CCSO14618 274 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 ADAP1O75689 374 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 IGHV1-8P0DP01 117 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 VDAC1P21796 283 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 IL3RAP26951 378 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 ERVFRD-1P60508 538 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 CT45A1Q5HYN5 189 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 GGNBP1Q5YKI7 109 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 SELENOHQ8IZQ5 122 aaKnown RBP10.53□□□□□ -0.72
VPS13D-205ENST00000473099 KIR3DL3Q8N743 410 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 OR9G1Q8NH87 305 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 CT45A3Q8NHU0 189 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 TCTEX1D2Q8WW35 142 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 ABHD14BQ96IU4 210 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 PRELID3BQ9Y3B1 194 aa10.53□□□□□ -0.72
VPS13D-205ENST00000473099 SPG11Q96JI7 2443 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 HMSDA8MTL9 139 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 RBFOX2O43251 390 aaKnown RBP eCLIP10.52□□□□□ -0.73
VPS13D-205ENST00000473099 ENSAO43768 121 aaKnown RBP10.52□□□□□ -0.73
VPS13D-205ENST00000473099 MMP23AO75900 390 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 SLC25A6P12236 298 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 ZNF16P17020 682 aaPredicted RBP10.52□□□□□ -0.73
VPS13D-205ENST00000473099 C4BPBP20851 252 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 DUTP33316 252 aaKnown RBP10.52□□□□□ -0.73
VPS13D-205ENST00000473099 THBS3P49746 956 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 ZNF134P52741 427 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 TAGLNQ01995 201 aaKnown RBP10.52□□□□□ -0.73
VPS13D-205ENST00000473099 IAH1Q2TAA2 248 aaPredicted RBP10.52□□□□□ -0.73
VPS13D-205ENST00000473099 ZNF787Q6DD87 383 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 C1orf122Q6ZSJ8 110 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 SLC35G3Q8N808 338 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 C10orf105Q8TEF2 133 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 LSM10Q969L4 123 aaKnown RBP10.52□□□□□ -0.73
VPS13D-205ENST00000473099 BPESC1Q9GZL8 116 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 TMEM133Q9H2Q1 129 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 PRR13Q9NZ81 148 aa10.52□□□□□ -0.73
VPS13D-205ENST00000473099 J3QR06 171 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 M0R1X1 148 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 FOXH1O75593 365 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 PSMB6P28072 239 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 GNG10P50151 68 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 PRRX1P54821 245 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 THOC7Q6I9Y2 204 aaKnown RBP10.51□□□□□ -0.73
VPS13D-205ENST00000473099 FAM53AQ6NSI3 398 aaPredicted RBP10.51□□□□□ -0.73
VPS13D-205ENST00000473099 LYZL2Q7Z4W2 148 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 FAM219AQ8IW50 185 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 LYG1Q8N1E2 194 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 LHFPL5Q8TAF8 219 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 THAP6Q8TBB0 222 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 PPP1R1CQ8WVI7 109 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 TMEM186Q96B77 213 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 RRNAD1Q96FB5 475 aaKnown RBP10.51□□□□□ -0.73
VPS13D-205ENST00000473099 SEC22AQ96IW7 307 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 AMMECR1Q9Y4X0 333 aaPredicted RBP10.51□□□□□ -0.73
VPS13D-205ENST00000473099 MYO9AB2RTY4 2548 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 DCHS2Q6V1P9 2916 aa10.51□□□□□ -0.73
VPS13D-205ENST00000473099 ITPR2Q14571 2701 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 SAA2-SAA4A0A096LPE2 208 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 G3V3Q6 166 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 SMLR1H3BR10 107 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 TOR1AO14656 332 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 SLC31A2O15432 143 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 SAA2P0DJI9 122 aaPredicted RBP10.5□□□□□ -0.73
VPS13D-205ENST00000473099 SLC25A4P12235 298 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 ZNF137PP52743 207 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 AKR1C2P52895 323 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 SMCO1Q147U7 214 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 C11orf87Q6NUJ2 197 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 TMEM65Q6PI78 240 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 BTNL3Q6UXE8 466 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 ODF3L1Q8IXM7 274 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 SPAG16Q8N0X2 631 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 C11orf42Q8N5U0 333 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 ZBTB8BQ8NAP8 495 aaPredicted RBP10.5□□□□□ -0.73
VPS13D-205ENST00000473099 BEND2Q8NDZ0 799 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 OR10X1Q8NGY0 326 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 CLDND2Q8NHS1 167 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 RNASE11Q8TAA1 199 aaKnown RBP10.5□□□□□ -0.73
VPS13D-205ENST00000473099 LEAP2Q969E1 77 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 OR10C1Q96KK4 312 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 GPHA2Q96T91 129 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 CLEC7AQ9BXN2 247 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 NARFLQ9H6Q4 476 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 BEX4Q9NWD9 120 aaPredicted RBP10.5□□□□□ -0.73
VPS13D-205ENST00000473099 ONECUT1Q9UBC0 465 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 KPTNQ9Y664 436 aa10.5□□□□□ -0.73
VPS13D-205ENST00000473099 A0A1B0GU03 582 aa10.49□□□□□ -0.73
VPS13D-205ENST00000473099 KIAA1324LA8MWY0 1029 aaPredicted RBP10.49□□□□□ -0.73
VPS13D-205ENST00000473099 VWC2LB2RUY7 222 aa10.49□□□□□ -0.73
VPS13D-205ENST00000473099 C22orf46C9J442 243 aa10.49□□□□□ -0.73
VPS13D-205ENST00000473099 MPC2O95563 127 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms