RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 EGR2P11161 476 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-203ENST00000472892 ECI1P42126 302 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 VEGFCP49767 419 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 PSMD7P51665 324 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 HLA-DRB3P79483 266 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 NDPQ00604 133 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 FABP5Q01469 135 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 ZNF616Q08AN1 781 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 C2orf76Q3KRA6 126 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 ZNF260Q3ZCT1 412 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 FAM3DQ96BQ1 224 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 MGLLQ99685 303 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 PECRQ9BY49 303 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 ACOT13Q9NPJ3 140 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 C12orf4Q9NQ89 552 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 WASHC3Q9Y3C0 194 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 NUBP2Q9Y5Y2 271 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 V9GY05 133 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 IGKV1-6A0A0C4DH72 117 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 H7C2Y5 167 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 HSPA12AO43301 675 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 SOX15O60248 233 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 GSTP1P09211 210 aaKnown RBP11.86□□□□□ -0.51
VTI1A-203ENST00000472892 CALRP27797 417 aaKnown RBP11.86□□□□□ -0.51
VTI1A-203ENST00000472892 RANBP1P43487 201 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 MAP2K4P45985 399 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 INSL3P51460 131 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 CLDN12P56749 244 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 GNB1P62873 340 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 PLAC9Q5JTB6 97 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 CD200R1LQ6Q8B3 271 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 TCTEX1D1Q8N7M0 179 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 OR56B1Q8NGI3 324 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 OR5B12Q96R08 314 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 PRR25Q96S07 402 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 CMSS1Q9BQ75 279 aaKnown RBP11.86□□□□□ -0.51
VTI1A-203ENST00000472892 CCDC90BQ9GZT6 254 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 RNF150Q9ULK6 438 aa11.86□□□□□ -0.51
VTI1A-203ENST00000472892 KMT2CQ8NEZ4 4911 aaKnown RBP11.86□□□□□ -0.51
VTI1A-203ENST00000472892 TRDCB7Z8K6 153 aa11.85□□□□□ -0.51
VTI1A-203ENST00000472892 DENRO43583 198 aaKnown RBP11.85□□□□□ -0.51
VTI1A-203ENST00000472892 NHLRC4P0CG21 123 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-203ENST00000472892 TMEM267Q0VDI3 215 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-203ENST00000472892 PSG5Q15238 335 aa11.85□□□□□ -0.51
VTI1A-203ENST00000472892 ECSCRQ19T08 205 aa11.85□□□□□ -0.51
VTI1A-203ENST00000472892 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
VTI1A-203ENST00000472892 ZNF383Q8NA42 475 aa11.85□□□□□ -0.51
VTI1A-203ENST00000472892 TOLLIPQ9H0E2 274 aa11.85□□□□□ -0.51
VTI1A-203ENST00000472892 TPSG1Q9NRR2 321 aa11.85□□□□□ -0.51
VTI1A-203ENST00000472892 RAB22AQ9UL26 194 aa11.85□□□□□ -0.51
VTI1A-203ENST00000472892 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-203ENST00000472892 KCNK7Q9Y2U2 307 aa11.85□□□□□ -0.51
VTI1A-203ENST00000472892 TMEM272A0A1B0GTI8 110 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 A0A1W2PN81 502 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 CHRNA7P36544 502 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 PRR20EP86478 221 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 PRR20CP86479 221 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 PRR20DP86480 221 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 PRR20BP86481 221 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 PRR20AP86496 221 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 PLA2G7Q13093 441 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 PLGLAQ15195 96 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 AKIRIN2Q53H80 203 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 PPP1R27Q86WC6 154 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 DRAXINQ8NBI3 349 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-203ENST00000472892 DCUN1D4Q92564 292 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 WWC2-AS2Q96NR7 200 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 ZNF221Q9UK13 617 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 GAB2Q9UQC2 676 aa11.84□□□□□ -0.51
VTI1A-203ENST00000472892 ZNF256Q9Y2P7 627 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-203ENST00000472892 TRAV1-2A0A0B4J238 106 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 IGKV1-16P04430 117 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 SERPINB10P48595 397 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 LINC00205P59089 165 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 PYHIN1Q6K0P9 492 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 ZNF429Q86V71 674 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 OR4A4PQ8NGN8 299 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 CASTOR1Q8WTX7 329 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 TSNAXQ99598 290 aaKnown RBP11.83□□□□□ -0.52
VTI1A-203ENST00000472892 ALX4Q9H161 411 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-203ENST00000472892 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.83□□□□□ -0.52
VTI1A-203ENST00000472892 RDH8Q9NYR8 311 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 METTL1Q9UBP6 276 aaKnown RBP11.83□□□□□ -0.52
VTI1A-203ENST00000472892 A3GALT2U3KPV4 340 aa11.83□□□□□ -0.52
VTI1A-203ENST00000472892 TENM3Q9P273 2699 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 LINC01619G3V211 115 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 OVOL1O14753 267 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 SPDEFO95238 335 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 TFAP2AP05549 437 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 LGALS1P09382 135 aaKnown RBP11.82□□□□□ -0.52
VTI1A-203ENST00000472892 SNRPBP14678 240 aaKnown RBP11.82□□□□□ -0.52
VTI1A-203ENST00000472892 RPS16P62249 146 aaKnown RBP11.82□□□□□ -0.52
VTI1A-203ENST00000472892 TBCEQ15813 527 aaPredicted RBP11.82□□□□□ -0.52
VTI1A-203ENST00000472892 SSX1Q16384 188 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 MOGAT2Q3SYC2 334 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 ACTBL2Q562R1 376 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 HES5Q5TA89 166 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 UNQ5815/PRO19632Q6UWF5 114 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 PDPNQ86YL7 162 aa11.82□□□□□ -0.52
VTI1A-203ENST00000472892 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms