RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 H3BPC8 53 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 SLC17A3O00476 420 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 ZW10O43264 779 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 PSMG1O95456 288 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 IGKV1-16P04430 117 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 ATP5G1P05496 136 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 LINC00614P0C842 121 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 OCMP0CE72 109 aaPredicted RBP1.43□□□□□ -2.18
PTCD3-209ENST00000472044 GZMBP10144 247 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 CCL3P10147 92 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 HIST1H1CP16403 213 aaKnown RBP1.43□□□□□ -2.18
PTCD3-209ENST00000472044 CD36P16671 472 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 GRPRP30550 384 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 OR10J1P30954 320 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 CD79BP40259 229 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 TAS2R45P59539 299 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 SNAP25P60880 206 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 HERVK_113P63121 156 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 MGAT3Q09327 533 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 TMEM267Q0VDI3 215 aaPredicted RBP1.43□□□□□ -2.18
PTCD3-209ENST00000472044 DNAL1Q4LDG9 190 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.43□□□□□ -2.18
PTCD3-209ENST00000472044 LGALS9CQ6DKI2 356 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 CD302Q8IX05 232 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 OR2D3Q8NGH3 330 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 RNASE11Q8TAA1 199 aaKnown RBP1.43□□□□□ -2.18
PTCD3-209ENST00000472044 ZNF514Q96K75 400 aaPredicted RBP1.43□□□□□ -2.18
PTCD3-209ENST00000472044 NKX6-2Q9C056 277 aaPredicted RBP1.43□□□□□ -2.18
PTCD3-209ENST00000472044 SLC22A4Q9H015 551 aa1.43□□□□□ -2.18
PTCD3-209ENST00000472044 IGHV3-15A0A0B4J1V0 119 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 TMEM235A6NFC5 223 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 FABP12A6NFH5 140 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 STX10O60499 249 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 ATP6V1G2O95670 118 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 CRYBB3P26998 211 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 CD200P41217 278 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 CA7P43166 264 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 ZNF140P52738 457 aaPredicted RBP1.42□□□□□ -2.18
PTCD3-209ENST00000472044 CLDN12P56749 244 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 SMAGPQ0VAQ4 97 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 KRTAP13-4Q3LI77 160 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 DNM1P34Q6PK57 102 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 DRAM2Q6UX65 266 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 ATP5L2Q7Z4Y8 100 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 FAM19A5Q7Z5A7 132 aaPredicted RBP1.42□□□□□ -2.18
PTCD3-209ENST00000472044 RIBC1Q8N443 379 aaPredicted RBP1.42□□□□□ -2.18
PTCD3-209ENST00000472044 OR10D3Q8NH80 312 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 CPNE2Q96FN4 548 aaPredicted RBP1.42□□□□□ -2.18
PTCD3-209ENST00000472044 MROQ9BYG7 248 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 SPANXB1Q9NS25 103 aaPredicted RBP1.42□□□□□ -2.18
PTCD3-209ENST00000472044 EURLQ9NYK6 297 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 A0A1W2PP64 1363 aa1.42□□□□□ -2.18
PTCD3-209ENST00000472044 EIF4G1Q04637 1599 aaKnown RBP1.42□□□□□ -2.18
PTCD3-209ENST00000472044 KDM5BQ9UGL1 1544 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 TRAV8-1A0A0A6YYK1 113 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 FNDC10F2Z333 226 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 H3BRN7 92 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 AZIN1O14977 448 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 HPGDSO60760 199 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 ADAP1O75689 374 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 EBPQ15125 230 aaKnown RBP1.41□□□□□ -2.18
PTCD3-209ENST00000472044 PDPK2PQ6A1A2 396 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 PLEKHG7Q6ZR37 379 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 FUNDC1Q8IVP5 155 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 SLC37A2Q8TED4 501 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 Q8WTZ3 238 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 CYGBQ8WWM9 190 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 ASB13Q8WXK3 278 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 DCUN1D5Q9BTE7 237 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 PECRQ9BY49 303 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 IMP3Q9NV31 184 aaKnown RBP1.41□□□□□ -2.18
PTCD3-209ENST00000472044 EMC3Q9P0I2 261 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 FAM215AQ9Y5M1 114 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 REREQ9P2R6 1566 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 DOCK10Q96BY6 2186 aa1.41□□□□□ -2.18
PTCD3-209ENST00000472044 TEX50A0A1B0GTY4 177 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 OR5K4A6NMS3 321 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 ITGB1BP1O14713 200 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 MRASO14807 208 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 ATP8B1O43520 1251 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 GSTZ1O43708 216 aaPredicted RBP1.4□□□□□ -2.19
PTCD3-209ENST00000472044 RPL14P50914 215 aaKnown RBP1.4□□□□□ -2.19
PTCD3-209ENST00000472044 UBE2G2P60604 165 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 SKP1P63208 163 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 HES1Q14469 280 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 C2orf91Q6ZV80 131 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 ZNF283Q8N7M2 679 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 MS4A6EQ96DS6 147 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 SMIM19Q96E16 107 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 PACRGQ96M98 296 aaPredicted RBP1.4□□□□□ -2.19
PTCD3-209ENST00000472044 C7orf50Q9BRJ6 194 aaKnown RBP1.4□□□□□ -2.19
PTCD3-209ENST00000472044 PRO2289Q9P1D8 64 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 KLK5Q9Y337 293 aaPredicted RBP1.4□□□□□ -2.19
PTCD3-209ENST00000472044 MUC6Q6W4X9 2439 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 WDR90Q96KV7 1748 aa1.4□□□□□ -2.19
PTCD3-209ENST00000472044 CR1P17927 2039 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 TINCRA0A1B0GVN0 87 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 OR11H12B2RN74 326 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 GNRH2O43555 120 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 NDUFB2O95178 105 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms