RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 PARP12Q9H0J9 701 aaKnown RBP15.43■□□□□ 0.06
SNX4-203ENST00000471751 GSX1Q9H4S2 264 aaPredicted RBP15.43■□□□□ 0.06
SNX4-203ENST00000471751 SLC2A9Q9NRM0 540 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 SDHAF2Q9NX18 166 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 VPS13CQ709C8 3753 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 HIVEP1P15822 2718 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 INMT-MINDY4F8WBC2 141 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 LY6LH3BQJ8 138 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 SLC31A2O15432 143 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 GAPDHP04406 335 aaKnown RBP15.43■□□□□ 0.06
SNX4-203ENST00000471751 ARG1P05089 322 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 GNG10P50151 68 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 PIGPP57054 158 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 ZNF816Q0VGE8 651 aaPredicted RBP15.43■□□□□ 0.06
SNX4-203ENST00000471751 CATR1Q13166 79 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 CCDC144NLQ6NUI1 221 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 SGPP2Q8IWX5 399 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 NANPQ8TBE9 248 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 CD300LFQ8TDQ1 290 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 LEAP2Q969E1 77 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 ZNF251Q9BRH9 671 aa15.43■□□□□ 0.06
SNX4-203ENST00000471751 CSPG4Q6UVK1 2322 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 FLNAP21333 2647 aaKnown RBP15.42■□□□□ 0.06
SNX4-203ENST00000471751 IGHV1-69DA0A0B4J2H0 117 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 ARPC1BO15143 372 aaKnown RBP15.42■□□□□ 0.06
SNX4-203ENST00000471751 MPPED1O15442 326 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 PGLYRP1O75594 196 aaPredicted RBP15.42■□□□□ 0.06
SNX4-203ENST00000471751 IGHV1-69P01742 117 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 RLN1P04808 185 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 ARHGDIBP52566 201 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 EIF4EBP1Q13541 118 aaPredicted RBP15.42■□□□□ 0.06
SNX4-203ENST00000471751 FAM53AQ6NSI3 398 aaPredicted RBP15.42■□□□□ 0.06
SNX4-203ENST00000471751 OR8H3Q8N146 312 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 RTN4IP1Q8WWV3 396 aaPredicted RBP15.42■□□□□ 0.06
SNX4-203ENST00000471751 LHX4Q969G2 390 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 ABHD14BQ96IU4 210 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 RNF150Q9ULK6 438 aa15.42■□□□□ 0.06
SNX4-203ENST00000471751 CELSR1Q9NYQ6 3014 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 SAA2-SAA4A0A096LPE2 208 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 CRYM-AS1A6NIL9 109 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 PROP1O75360 226 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 SAA2P0DJI9 122 aaPredicted RBP15.41■□□□□ 0.06
SNX4-203ENST00000471751 RRASP10301 218 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 ANXA3P12429 323 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 COX7A1P24310 79 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 MC5RP33032 325 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 DUTP33316 252 aaKnown RBP15.41■□□□□ 0.06
SNX4-203ENST00000471751 KIR2DS2P43631 304 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 THBS3P49746 956 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 RIPPLY3P57055 190 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 GPN1Q9HCN4 374 aaPredicted RBP15.41■□□□□ 0.06
SNX4-203ENST00000471751 PRELID3BQ9Y3B1 194 aa15.41■□□□□ 0.06
SNX4-203ENST00000471751 SNRPGP15A8MWD9 76 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 HSD17B6O14756 317 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 SMAD7O15105 426 aaKnown RBP15.4■□□□□ 0.06
SNX4-203ENST00000471751 NPFFO15130 113 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 RBFOX2O43251 390 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNX4-203ENST00000471751 FSHBP01225 129 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 OR4E1P0C645 316 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 RPA2P15927 270 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 ZNF16P17020 682 aaPredicted RBP15.4■□□□□ 0.06
SNX4-203ENST00000471751 F2RP25116 425 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 BAMBIQ13145 260 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 UTF1Q5T230 341 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 C9orf139Q6ZV77 190 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 TGIF2LXQ8IUE1 241 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 RPEQ96AT9 228 aa15.4■□□□□ 0.06
SNX4-203ENST00000471751 LIN7CQ9NUP9 197 aaKnown RBP15.4■□□□□ 0.06
SNX4-203ENST00000471751 TRAV6A0A075B6T7 132 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 A0A1W2PPE3 182 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 IGHV3-7P01780 117 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 SRPXP78539 464 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 TPTE2P1Q5T6R2 138 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 GLDNQ6ZMI3 551 aaPredicted RBP15.39■□□□□ 0.05
SNX4-203ENST00000471751 Q71RC1 249 aaPredicted RBP15.39■□□□□ 0.05
SNX4-203ENST00000471751 TMED4Q7Z7H5 227 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 OR5AN1Q8NGI8 311 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 SMR3AQ99954 134 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 MEGF9Q9H1U4 602 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 NAA60Q9H7X0 242 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 NUP50Q9UKX7 468 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 FLVCR2Q9UPI3 526 aa15.39■□□□□ 0.05
SNX4-203ENST00000471751 C2CD3Q4AC94 2353 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 A0A0B4J2A0 478 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 TEX13DA0A0J9YY54 714 aaPredicted RBP15.38■□□□□ 0.05
SNX4-203ENST00000471751 H0Y980 276 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 KRTAP1-1Q07627 177 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 HABP2Q14520 560 aaPredicted RBP15.38■□□□□ 0.05
SNX4-203ENST00000471751 AANATQ16613 207 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 DHRS7BQ6IAN0 325 aaPredicted RBP15.38■□□□□ 0.05
SNX4-203ENST00000471751 TBC1D26Q86UD7 250 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 TMEM230Q96A57 120 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 RNF5Q99942 180 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 AIFM2Q9BRQ8 373 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 SHPKQ9UHJ6 478 aa15.38■□□□□ 0.05
SNX4-203ENST00000471751 NAV3Q8IVL0 2385 aa15.37■□□□□ 0.05
SNX4-203ENST00000471751 C3orf85A0A1B0GTC6 90 aa15.37■□□□□ 0.05
SNX4-203ENST00000471751 A8MV72 311 aaPredicted RBP15.37■□□□□ 0.05
SNX4-203ENST00000471751 M0R1X1 148 aa15.37■□□□□ 0.05
SNX4-203ENST00000471751 SFT2D2O95562 160 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms