RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 UGT2B10P36537 528 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 CCR2P41597 374 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 TSPAN5P62079 268 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 GTF2BQ00403 316 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 SLC36A1Q7Z2H8 476 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 RPS19BP1Q86WX3 136 aaKnown RBP-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 PLCZ1Q86YW0 608 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 OR13C9Q8NGT0 318 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 ABHD14BQ96IU4 210 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 MED28Q9H204 178 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 CLEC2DQ9UHP7 191 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 PSME2Q9UL46 239 aa-0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 HMSDA8MTL9 139 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 GEMIN2O14893 280 aaKnown RBP-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 UBE2L6O14933 153 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 NPPAP01160 153 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 CCNOP22674 350 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 RPL27AP46776 148 aaKnown RBP-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 OR1E2P47887 323 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 TAS2R30P59541 319 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 ARHGAP11BQ3KRB8 267 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 HSP90AA4PQ58FG1 418 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 FAM173BQ6P4H8 233 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 AMTNQ6UX39 209 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 SPATA12Q7Z6I5 190 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 MTERF4Q7Z6M4 381 aaKnown RBP-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 DYNAPQ8N1N2 210 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 OR1L8Q8NGR8 309 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 SMCR5Q8TEV8 140 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 MRAP2Q96G30 205 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 MYCBPQ99417 103 aaPredicted RBP-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 DOHHQ9BU89 302 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 TMEM216Q9P0N5 145 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 LINC00527Q9UJ94 153 aa-0.04□□□□□ -2.42
PRPF40A-207ENST00000471701 TRAPPC13A5PLN9 417 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 H0YIV9 168 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 STK16O75716 305 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 IGLV3-27P01718 113 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 STAG3L2P0CL84 134 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 RCVRNP35243 200 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 STC1P52823 247 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 TAS2R45P59539 299 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 TBC1D28Q2M2D7 210 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 ACBD4Q8NC06 268 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 OR52K2Q8NGK3 314 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 REG4Q9BYZ8 158 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 RPRD1BQ9NQG5 326 aaKnown RBP-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 SLC2A9Q9NRM0 540 aa-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 SYNE1Q8NF91 8797 aaKnown RBP-0.05□□□□□ -2.42
PRPF40A-207ENST00000471701 CHD2O14647 1828 aaKnown RBP-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 GOLGA6L7A0A1B0GV03 622 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 E7EWF7 191 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 M0QYV0 167 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 TXNDC9O14530 226 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 FABP7O15540 132 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 SCN2BO60939 215 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 PSMG1O95456 288 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 PRH1P02810 166 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 SERPINA7P05543 415 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 IFNGR2P38484 337 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 CDK9P50750 372 aaKnown RBP-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 OR10A3P58181 314 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 PACRGLQ8N7B6 248 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 OR5K1Q8NHB7 308 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 TAMM41Q96BW9 452 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 CATSPER2Q96P56 530 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 TTTY13Q9BZ97 58 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 SNX24Q9Y343 169 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 GLI3P10071 1580 aa-0.06□□□□□ -2.42
PRPF40A-207ENST00000471701 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 EFCAB9A8MZ26 197 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 KLRC4O43908 158 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 NPYP01303 97 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 UBE2KP61086 200 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 ELOBQ15370 118 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 SPATA8Q6RVD6 105 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 DAND5Q8N907 189 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 ZNF439Q8NDP4 499 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 RNASE6Q93091 150 aaKnown RBP-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 SMR3AQ99954 134 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 TAAR3PQ9P1P4 343 aa-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 NXT1Q9UKK6 140 aaKnown RBP-0.07□□□□□ -2.42
PRPF40A-207ENST00000471701 IGHV1-18A0A0C4DH31 117 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 GSTTP1A0A1W2PQM5 241 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 CYTH3O43739 400 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 ORC5O43913 435 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 RBM11P57052 281 aaKnown RBP-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 OR10J3Q5JRS4 329 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 XKRXQ6PP77 449 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 SSX6Q7RTT6 188 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 PDCL2Q8N4E4 241 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 C9orf163Q8N9P6 203 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 CDRT4Q8N9R6 151 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 OR2Y1Q8NGV0 311 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 ACY3Q96HD9 319 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 RBM7Q9Y580 266 aaKnown RBP-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 CHD5Q8TDI0 1954 aa-0.08□□□□□ -2.42
PRPF40A-207ENST00000471701 SETD5Q9C0A6 1442 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 A0A0D9SEW6 157 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 GOLGA8IPA6NC78 632 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms