RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 TMEM31Q5JXX7 168 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 SPATA31B1PQ5VZV4 182 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 LHFPL1Q86WI0 220 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 C10orf126Q8N4M7 172 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 CNEP1R1Q8N9A8 125 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 LHFPL5Q8TAF8 219 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 DYNC2LI1Q8TCX1 351 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 RNASEH2CQ8TDP1 164 aaKnown RBP0.58□□□□□ -2.32
RBM39-228ENST00000471635 MIEN1Q9BRT3 115 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 OR51B6Q9H340 312 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 UBQLN4Q9NRR5 601 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 AGPAT3Q9NRZ7 376 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 SNX10Q9Y5X0 201 aa0.58□□□□□ -2.32
RBM39-228ENST00000471635 PUS1Q9Y606 427 aaKnown RBP eCLIP0.58□□□□□ -2.32
RBM39-228ENST00000471635 CHD2O14647 1828 aaKnown RBP0.57□□□□□ -2.32
RBM39-228ENST00000471635 TRAV41A0A0B4J266 112 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 GOLGA8QA0A0J9YX86 632 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 F5H5K5 113 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 APOA1P02647 267 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 S100A9P06702 114 aaKnown RBP0.57□□□□□ -2.32
RBM39-228ENST00000471635 IDH3GP51553 393 aaPredicted RBP0.57□□□□□ -2.32
RBM39-228ENST00000471635 DLX6P56179 175 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 TAS2R45P59539 299 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 RAB8AP61006 207 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 SLC38A11Q08AI6 406 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 XRCC4Q13426 336 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 PABPC1L2AQ5JQF8 200 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 RBM48Q5RL73 367 aaKnown RBP0.57□□□□□ -2.32
RBM39-228ENST00000471635 COPS6Q7L5N1 327 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 LRRC28Q86X40 367 aaPredicted RBP0.57□□□□□ -2.32
RBM39-228ENST00000471635 CLDND2Q8NHS1 167 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 C10orf105Q8TEF2 133 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 ASB17Q8WXJ9 295 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 PPWD1Q96BP3 646 aaKnown RBP0.57□□□□□ -2.32
RBM39-228ENST00000471635 SLC35G5Q96KT7 338 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 CYTH2Q99418 400 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 ACBD6Q9BR61 282 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 BABAM2Q9NXR7 383 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 STK38LQ9Y2H1 464 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 WDR90Q96KV7 1748 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 FREM1Q5H8C1 2179 aa0.57□□□□□ -2.32
RBM39-228ENST00000471635 TRGV5A0A0B4J1U4 118 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 A0A1W2PQD3 144 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 PGLYRP1O75594 196 aaPredicted RBP0.56□□□□□ -2.32
RBM39-228ENST00000471635 ARL6IP5O75915 188 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 PSMG1O95456 288 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 C1QCP02747 245 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 BPGMP07738 259 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 CD24P25063 80 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 AGTR1P30556 359 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 OR10J1P30954 320 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 STC1P52823 247 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 HERVK_113P63121 156 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 RELAQ04206 551 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 EXOC3L4Q17RC7 722 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 HSP90B2PQ58FF3 399 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 AMTNQ6UX39 209 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 DRAM2Q6UX65 266 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 SCGB1D4Q6XE38 83 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 OR5J2Q8NH18 312 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 RPS4Y2Q8TD47 263 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 CCDC12Q8WUD4 166 aaPredicted RBP0.56□□□□□ -2.32
RBM39-228ENST00000471635 CYGBQ8WWM9 190 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 ZNF75CPQ92670 426 aaPredicted RBP0.56□□□□□ -2.32
RBM39-228ENST00000471635 RNASE6Q93091 150 aaKnown RBP0.56□□□□□ -2.32
RBM39-228ENST00000471635 CYSTM1Q9H1C7 97 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 ASCL3Q9NQ33 180 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 SLC2A9Q9NRM0 540 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 GLS2Q9UI32 602 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 HHLA3Q9XRX5 114 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 CHD5Q8TDI0 1954 aa0.56□□□□□ -2.32
RBM39-228ENST00000471635 NPATQ14207 1427 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 BAZ2BQ9UIF8 2168 aaKnown RBP0.55□□□□□ -2.32
RBM39-228ENST00000471635 REREQ9P2R6 1566 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 DIDO1Q9BTC0 2240 aaKnown RBP0.55□□□□□ -2.32
RBM39-228ENST00000471635 MRASO14807 208 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 LIN7AO14910 233 aaPredicted RBP0.55□□□□□ -2.32
RBM39-228ENST00000471635 HBZP02008 142 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 SYT1P21579 422 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 TMEM267Q0VDI3 215 aaPredicted RBP0.55□□□□□ -2.32
RBM39-228ENST00000471635 SYCP1Q15431 976 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 ATP5L2Q7Z4Y8 100 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 SPATA12Q7Z6I5 190 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 SLC35E3Q7Z769 313 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 NATD1Q8N6N6 113 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 OR2D3Q8NGH3 330 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 SMCR5Q8TEV8 140 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 OR7D2Q96RA2 312 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 NKX6-2Q9C056 277 aaPredicted RBP0.55□□□□□ -2.32
RBM39-228ENST00000471635 MS4A12Q9NXJ0 267 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 DLG5Q8TDM6 1919 aa0.55□□□□□ -2.32
RBM39-228ENST00000471635 BHLHE40O14503 412 aa0.54□□□□□ -2.32
RBM39-228ENST00000471635 UBE2L6O14933 153 aa0.54□□□□□ -2.32
RBM39-228ENST00000471635 GSTZ1O43708 216 aaPredicted RBP0.54□□□□□ -2.32
RBM39-228ENST00000471635 ZNF737O75373 536 aa0.54□□□□□ -2.32
RBM39-228ENST00000471635 CA7P43166 264 aa0.54□□□□□ -2.32
RBM39-228ENST00000471635 CDK9P50750 372 aaKnown RBP0.54□□□□□ -2.32
RBM39-228ENST00000471635 RBM11P57052 281 aaKnown RBP0.54□□□□□ -2.32
RBM39-228ENST00000471635 TAS2R30P59541 319 aa0.54□□□□□ -2.32
RBM39-228ENST00000471635 DAD1P61803 113 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms