RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SLC22A1O15245 554 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 SOX15O60248 233 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 SPDEFO95238 335 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 IGHV3-11P01762 117 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 TRGV3P03979 118 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 CAPGP40121 348 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 OR3A3P47888 321 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 TAS2R43P59537 309 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 TATDN3Q17R31 274 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 C6orf141Q5SZD1 244 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 LCN12Q6JVE5 192 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 MOB1BQ7L9L4 216 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 ODF3L1Q8IXM7 274 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 MRPL30Q8TCC3 161 aaKnown RBP7□□□□□ -1.29
CPSF4-211ENST00000471455 PYDC1Q8WXC3 89 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 RDH12Q96NR8 316 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 NEDD4LQ96PU5 975 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 TSNAXQ99598 290 aaKnown RBP7□□□□□ -1.29
CPSF4-211ENST00000471455 UQCC2Q9BRT2 126 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 IFI27L2Q9H2X8 130 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 FBXL15Q9H469 300 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 BABAM2Q9NXR7 383 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 CNOT2Q9NZN8 540 aaKnown RBP7□□□□□ -1.29
CPSF4-211ENST00000471455 AASSQ9UDR5 926 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 SLC23A1Q9UHI7 598 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 EXOSC1Q9Y3B2 195 aaKnown RBP7□□□□□ -1.29
CPSF4-211ENST00000471455 NUBP2Q9Y5Y2 271 aa7□□□□□ -1.29
CPSF4-211ENST00000471455 TNCP24821 2201 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 LOC100130705A0A1B0GUX0 176 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 OGG1O15527 345 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 UBBP0CG47 229 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 CPEP16870 476 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 AADACP22760 399 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 MAPK3P27361 379 aaPredicted RBP6.99□□□□□ -1.29
CPSF4-211ENST00000471455 HMGN3Q15651 99 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 DMKNQ6E0U4 476 aaPredicted RBP6.99□□□□□ -1.29
CPSF4-211ENST00000471455 XAF1Q6GPH4 301 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 ZNF562Q6V9R5 426 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 ADAMTSL5Q6ZMM2 481 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 Q8N1Y9 231 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 Q8N402 240 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 POC5Q8NA72 575 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 ZNF555Q8NEP9 628 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 CASTOR1Q8WTX7 329 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 IL1F10Q8WWZ1 152 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 GHSRQ92847 366 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 RITA1Q96K30 269 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 MS4A10Q96PG2 267 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 BANF2Q9H503 90 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 CHMP1AQ9HD42 196 aaPredicted RBP6.99□□□□□ -1.29
CPSF4-211ENST00000471455 ZNF355PQ9NSJ1 428 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 GAR1Q9NY12 217 aaKnown RBP6.99□□□□□ -1.29
CPSF4-211ENST00000471455 METTL1Q9UBP6 276 aaKnown RBP6.99□□□□□ -1.29
CPSF4-211ENST00000471455 FBXO7Q9Y3I1 522 aa6.99□□□□□ -1.29
CPSF4-211ENST00000471455 TRAV8-7A0A075B6U6 113 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 H0YJW9 148 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 ITGB1BP1O14713 200 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 CA2P00918 260 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 APOA2P02652 100 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 ATF4P18848 351 aaPredicted RBP6.98□□□□□ -1.29
CPSF4-211ENST00000471455 ETV1P50549 477 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 HAGHQ16775 308 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 OR2G6Q5TZ20 316 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 HAPLN4Q86UW8 402 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 LFNGQ8NES3 379 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 OR5AN1Q8NGI8 311 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 OR9G4Q8NGQ1 327 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 OR13C5Q8NGS8 318 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 OR2K2Q8NGT1 345 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 TMEM68Q96MH6 324 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 OR14A2Q96R54 314 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 SLC29A1Q99808 456 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 TMED9Q9BVK6 235 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 RIMS4Q9H426 269 aaPredicted RBP6.98□□□□□ -1.29
CPSF4-211ENST00000471455 MGAT4AQ9UM21 535 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 DIMT1Q9UNQ2 313 aaKnown RBP6.98□□□□□ -1.29
CPSF4-211ENST00000471455 STARD9Q9P2P6 4700 aa6.98□□□□□ -1.29
CPSF4-211ENST00000471455 TRBV5-7A0A0A0MS05 114 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 A0A0B4J203 849 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 CNIH1O95406 144 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 CT45A6P0DMU7 189 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 CT45A5P0DMU8 189 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 CT45A7P0DMV0 189 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 LGALS7P47929 136 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 CBX3Q13185 183 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 LCE4AQ5TA78 99 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 PDPNQ86YL7 162 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 LAX1Q8IWV1 398 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 GRPEL2Q8TAA5 225 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 APH1BQ8WW43 257 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 FAM46BQ96A09 425 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 ORAI1Q96D31 301 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 RBMXL1Q96E39 390 aaKnown RBP6.97□□□□□ -1.29
CPSF4-211ENST00000471455 CLCC1Q96S66 551 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 LYSTQ99698 3801 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 FAM103A1Q9BTL3 118 aaKnown RBP6.97□□□□□ -1.29
CPSF4-211ENST00000471455 SIGLEC8Q9NYZ4 499 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 PEMTQ9UBM1 199 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 ZNF221Q9UK13 617 aa6.97□□□□□ -1.29
CPSF4-211ENST00000471455 FCN1O00602 326 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms