RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 ZNF345Q14585 488 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 SLC25A48Q6ZT89 311 aaKnown RBP21.31■■□□□ 1
U2AF1-208ENST00000471250 ACOT7LQ6ZUV0 252 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 FAM219AQ8IW50 185 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 OR1S1Q8NH92 325 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 LSM10Q969L4 123 aaKnown RBP21.31■■□□□ 1
U2AF1-208ENST00000471250 RAB39BQ96DA2 213 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 ZFP57Q9NU63 452 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 RNF222A6NCQ9 220 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 C17orf98A8MV24 154 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 BRWD1-AS2P59051 145 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 RPL39P5Q59GN2 51 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 WDR25Q64LD2 544 aaPredicted RBP21.31■■□□□ 1
U2AF1-208ENST00000471250 KCNRGQ8N5I3 272 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 GPR146Q96CH1 333 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 ARL6Q9H0F7 186 aa21.31■■□□□ 1
U2AF1-208ENST00000471250 PATZ1Q9HBE1 687 aaKnown RBP21.31■■□□□ 1
U2AF1-208ENST00000471250 DOPEY1Q5JWR5 2465 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 M0R1X1 148 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 RAB29O14966 203 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 DEDDO75618 318 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 SCGB1D2O95969 90 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 RLN2P04090 185 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 SLC25A6P12236 298 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 GPR6P46095 362 aaPredicted RBP21.3■■□□□ 1
U2AF1-208ENST00000471250 GNG10P50151 68 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 SMCO1Q147U7 214 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 THOC7Q6I9Y2 204 aaKnown RBP21.3■■□□□ 1
U2AF1-208ENST00000471250 ODF3L1Q8IXM7 274 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 SPAG16Q8N0X2 631 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 INO80EQ8NBZ0 244 aaPredicted RBP21.3■■□□□ 1
U2AF1-208ENST00000471250 C8orf46Q8TAG6 207 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 LSM5Q9Y4Y9 91 aaKnown RBP21.3■■□□□ 1
U2AF1-208ENST00000471250 EPG5Q9HCE0 2579 aa21.3■■□□□ 1
U2AF1-208ENST00000471250 A0A0G2JRQ6 117 aa21.29■■□□□ 1
U2AF1-208ENST00000471250 K7EPK0 472 aa21.29■■□□□ 1
U2AF1-208ENST00000471250 RAMP3O60896 148 aa21.29■■□□□ 1
U2AF1-208ENST00000471250 IGKV1-5P01602 117 aa21.29■■□□□ 1
U2AF1-208ENST00000471250 AP2S1P53680 142 aaPredicted RBP21.29■■□□□ 1
U2AF1-208ENST00000471250 FOXRED2Q8IWF2 684 aa21.29■■□□□ 1
U2AF1-208ENST00000471250 FAM71E2Q8N5Q1 922 aa21.29■■□□□ 1
U2AF1-208ENST00000471250 F5H0A9 414 aaPredicted RBP21.28■■□□□ 1
U2AF1-208ENST00000471250 OR2B11Q5JQS5 317 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 NCR3LG1Q68D85 454 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 C1orf229Q6ZS94 237 aaPredicted RBP21.28■■□□□ 1
U2AF1-208ENST00000471250 LYG1Q8N1E2 194 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 ZNF251Q9BRH9 671 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 PAIP2BQ9ULR5 123 aaKnown RBP21.28■■□□□ 1
U2AF1-208ENST00000471250 SAA2-SAA4A0A096LPE2 208 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 A0A1B0GU03 582 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 ST8SIA3O43173 380 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 SAA2P0DJI9 122 aaPredicted RBP21.28■■□□□ 1
U2AF1-208ENST00000471250 LINC00205P59089 165 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 C11orf42Q8N5U0 333 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 POMT1Q9Y6A1 747 aa21.28■■□□□ 1
U2AF1-208ENST00000471250 ZNF816Q0VGE8 651 aaPredicted RBP21.27■■□□□ 1
U2AF1-208ENST00000471250 C8orf31Q8N9H6 132 aa21.27■■□□□ 1
U2AF1-208ENST00000471250 RNASE11Q8TAA1 199 aaKnown RBP21.27■■□□□ 1
U2AF1-208ENST00000471250 CD300LFQ8TDQ1 290 aa21.27■■□□□ 1
U2AF1-208ENST00000471250 RRNAD1Q96FB5 475 aaKnown RBP21.27■■□□□ 1
U2AF1-208ENST00000471250 ZNF462Q96JM2 2506 aa21.27■■□□□ 1
U2AF1-208ENST00000471250 A0A087X0M5 115 aa21.26■□□□□ 0.99
U2AF1-208ENST00000471250 A0A1B0GX30 115 aa21.26■□□□□ 0.99
U2AF1-208ENST00000471250 A0A1W2PPH5 198 aa21.26■□□□□ 0.99
U2AF1-208ENST00000471250 PITX3O75364 302 aa21.26■□□□□ 0.99
U2AF1-208ENST00000471250 IGHV1-8P0DP01 117 aa21.26■□□□□ 0.99
U2AF1-208ENST00000471250 AKR1C2P52895 323 aa21.26■□□□□ 0.99
U2AF1-208ENST00000471250 LY6G5BQ8NDX9 201 aa21.26■□□□□ 0.99
U2AF1-208ENST00000471250 ZNF596Q8TC21 504 aa21.26■□□□□ 0.99
U2AF1-208ENST00000471250 DOCK11Q5JSL3 2073 aa21.26■□□□□ 0.99
U2AF1-208ENST00000471250 KCNAB3O43448 404 aa21.25■□□□□ 0.99
U2AF1-208ENST00000471250 ATG12O94817 140 aa21.25■□□□□ 0.99
U2AF1-208ENST00000471250 NUP62P37198 522 aaPredicted RBP21.25■□□□□ 0.99
U2AF1-208ENST00000471250 NKX2-1P43699 371 aaPredicted RBP21.25■□□□□ 0.99
U2AF1-208ENST00000471250 LINC00311Q8N616 119 aa21.25■□□□□ 0.99
U2AF1-208ENST00000471250 OR8H1Q8NGG4 311 aa21.25■□□□□ 0.99
U2AF1-208ENST00000471250 SESN1Q9Y6P5 492 aa21.25■□□□□ 0.99
U2AF1-208ENST00000471250 PPIAL4CA0A0B4J2A2 164 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 S1PR2O95136 353 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 PPIAL4GP0DN37 164 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 GNB2P62879 340 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 ID3Q02535 119 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 SP5Q6BEB4 398 aaPredicted RBP21.24■□□□□ 0.99
U2AF1-208ENST00000471250 TEX261Q6UWH6 196 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 DDB2Q92466 427 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 AQP10Q96PS8 301 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 CCL19Q99731 98 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 RCL1Q9Y2P8 373 aaKnown RBP21.24■□□□□ 0.99
U2AF1-208ENST00000471250 PRELID3BQ9Y3B1 194 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 MMP24Q9Y5R2 645 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 U3KQ87 197 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 E5RGE8 158 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 EPHA1P21709 976 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 KIR2DS2P43631 304 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 THBS3P49746 956 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 Q6ZRM9 215 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 ZNF767PQ75MW2 155 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 ADTRPQ96IZ2 230 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 S1PR3Q99500 378 aa21.24■□□□□ 0.99
U2AF1-208ENST00000471250 NSG2Q9Y328 171 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms