RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 K7EIL1 84 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 TPST1O60507 370 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 EIF3GO75821 320 aaKnown RBP eCLIP3.84□□□□□ -1.79
CKS1B-204ENST00000471245 AHSA1O95433 338 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 IGHV1-46P01743 117 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 IFNW1P05000 195 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 SERPINA5P05154 406 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 BCHEP06276 602 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 S100A3P33764 101 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 SERPINB5P36952 375 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 MPV17P39210 176 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 AQP2P41181 271 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 GNB2P62879 340 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 ADARB1P78563 741 aaKnown RBP3.84□□□□□ -1.79
CKS1B-204ENST00000471245 HPCAP84074 193 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF92Q03936 586 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 GLO1Q04760 184 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 VAMP3Q15836 100 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 RPEL1Q2QD12 228 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 LIN52Q52LA3 116 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF621Q6ZSS3 439 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 IFT20Q8IY31 132 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 LRRC34Q8IZ02 419 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 CMTM1Q8IZ96 169 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 TMEM61Q8N0U2 210 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 CACNG8Q8WXS5 425 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 TMEM54Q969K7 222 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 MAL2Q969L2 176 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 SH3GL3Q99963 347 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 RARRES2Q99969 163 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 RASL11BQ9BPW5 248 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 C16orf95Q9H693 158 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 SPACA1Q9HBV2 294 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 TREM1Q9NP99 234 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 PLSCR3Q9NRY6 295 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 OR5V1Q9UGF6 321 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 LGALS13Q9UHV8 139 aa3.84□□□□□ -1.79
CKS1B-204ENST00000471245 CSMD3Q7Z407 3707 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 TRAV36DV7A0A075B6V5 113 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 A0A096LPI6 279 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 PRSS37A4D1T9 235 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 PLPP3O14495 311 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 RAB36O95755 333 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 MMP7P09237 267 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 BTCP35070 178 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 KCNJ3P48549 501 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 WNT4P56705 351 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 DSTNP60981 165 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 NDPQ00604 133 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 DAZ2Q13117 558 aaKnown RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 C1DQ13901 141 aaKnown RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 USF2Q15853 346 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 TMEM155Q4W5P6 130 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 LRRC10Q5BKY1 277 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 GPR107Q5VW38 600 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 CNIH2Q6PI25 160 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 LRRN1Q6UXK5 716 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 LRRC28Q86X40 367 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 MSRB3Q8IXL7 192 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 C1orf174Q8IYL3 243 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF101Q8IZC7 436 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 SLC22A24Q8N4F4 322 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 SPICQ8N5J4 248 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 SUMF2Q8NBJ7 301 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 SLC30A7Q8NEW0 376 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 OR9I1Q8NGQ6 314 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 LRRC20Q8TCA0 184 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 GEMIN6Q8WXD5 167 aaKnown RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 C11orf40Q8WZ69 217 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 ZIM3Q96PE6 472 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 OR52E6Q96RD3 313 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 WDR55Q9H6Y2 383 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 TPT1P8Q9HAU6 139 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 BCL2L10Q9HD36 194 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 DAZ3Q9NR90 486 aaKnown RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 TMEM38BQ9NVV0 291 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 ADA2Q9NZK5 511 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 CCDC59Q9P031 241 aaKnown RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 POFUT2Q9Y2G5 429 aa3.83□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF256Q9Y2P7 627 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-204ENST00000471245 PLECQ15149 4684 aaKnown RBP3.82□□□□□ -1.8
CKS1B-204ENST00000471245 HYDINQ4G0P3 5121 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 IGKV1D-43A0A0B4J1Z2 117 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 A0A0B4J2A0 478 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 A0A0B4J2E0 115 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF816-ZNF321PA0A0X1KG74 233 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 KIR2DS1A0A191URI9 304 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 A0A1B0GX12 115 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF726A6NNF4 738 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 KLLNB2CW77 178 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 RFXANKO14593 260 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 PPP1R2P9O14990 202 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 GMDSO60547 372 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 UBL3O95164 117 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 FARS2O95363 451 aaKnown RBP3.82□□□□□ -1.8
CKS1B-204ENST00000471245 SERPINE1P05121 402 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF19P17023 458 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 BGNP21810 368 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms