RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 HAPLN4Q86UW8 402 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 GAPTQ8N292 157 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 POC5Q8NA72 575 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 OR1L1Q8NH94 360 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 CASTOR1Q8WTX7 329 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 GHSRQ92847 366 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 RITA1Q96K30 269 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 TAS2R4Q9NYW5 299 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 EXOGQ9Y2C4 368 aaKnown RBP6.72□□□□□ -1.33
XRN1-208ENST00000470537 KLK5Q9Y337 293 aaPredicted RBP6.72□□□□□ -1.33
XRN1-208ENST00000470537 WASHC3Q9Y3C0 194 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 HYDINQ4G0P3 5121 aa6.72□□□□□ -1.33
XRN1-208ENST00000470537 SAA2-SAA4A0A096LPE2 208 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 ANKRD34BA5PLL1 514 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 SC5DO75845 299 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 NDUFB8O95169 186 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 SPDEFO95238 335 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 BRI3O95415 125 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 SAA2P0DJI9 122 aaPredicted RBP6.71□□□□□ -1.34
XRN1-208ENST00000470537 T-ENOLP0DO92 83 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 POLR2IP36954 125 aaKnown RBP6.71□□□□□ -1.34
XRN1-208ENST00000470537 SOX2P48431 317 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 RIPK1Q13546 671 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 FXYD3Q14802 87 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 RPL22L1Q6P5R6 122 aaKnown RBP6.71□□□□□ -1.34
XRN1-208ENST00000470537 FAM131AQ6UXB0 335 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 SLC16A13Q7RTY0 426 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 CDH26Q8IXH8 852 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 ODF3L1Q8IXM7 274 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 CCDC197Q8NCU1 140 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 NEURL2Q9BR09 285 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 THAP7Q9BT49 309 aaPredicted RBP6.71□□□□□ -1.34
XRN1-208ENST00000470537 METTL1Q9UBP6 276 aaKnown RBP6.71□□□□□ -1.34
XRN1-208ENST00000470537 FBXO7Q9Y3I1 522 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 AP4S1Q9Y587 144 aa6.71□□□□□ -1.34
XRN1-208ENST00000470537 OR11H12B2RN74 326 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 FCN1O00602 326 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 CSN3P07498 182 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 EGR2P11161 476 aaPredicted RBP6.7□□□□□ -1.34
XRN1-208ENST00000470537 CPEP16870 476 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 PPP1CCP36873 323 aaKnown RBP6.7□□□□□ -1.34
XRN1-208ENST00000470537 OR3A3P47888 321 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 ADARB1P78563 741 aaKnown RBP6.7□□□□□ -1.34
XRN1-208ENST00000470537 NDPQ00604 133 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 ANKRD55Q3KP44 614 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 ZNF343Q6P1L6 599 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 IL34Q6ZMJ4 242 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 TMPRSS11AQ6ZMR5 421 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 OR52L2PQ8NGH6 319 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 OR5AN1Q8NGI8 311 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 DYNLRB2Q8TF09 96 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 CLCC1Q96S66 551 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 ZNF184Q99676 751 aaPredicted RBP6.7□□□□□ -1.34
XRN1-208ENST00000470537 FAM110AQ9BQ89 295 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 SULT4A1Q9BR01 284 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 FAM103A1Q9BTL3 118 aaKnown RBP6.7□□□□□ -1.34
XRN1-208ENST00000470537 TMPRSS5Q9H3S3 457 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 ISG20L2Q9H9L3 353 aaKnown RBP6.7□□□□□ -1.34
XRN1-208ENST00000470537 PLEKHA3Q9HB20 300 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 ZNF581Q9P0T4 197 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 SLC23A1Q9UHI7 598 aa6.7□□□□□ -1.34
XRN1-208ENST00000470537 ITGB1BP1O14713 200 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 CA2P00918 260 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 CT45A6P0DMU7 189 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 CT45A5P0DMU8 189 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 CT45A7P0DMV0 189 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 RPS16P62249 146 aaKnown RBP6.69□□□□□ -1.34
XRN1-208ENST00000470537 PSG5Q15238 335 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 TMEM217Q8N7C4 229 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 OR5T1Q8NG75 326 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 GRPEL2Q8TAA5 225 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 IL1F10Q8WWZ1 152 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 THRSPQ92748 146 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 LGALS12Q96DT0 336 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 CENPNQ96H22 339 aaPredicted RBP6.69□□□□□ -1.34
XRN1-208ENST00000470537 SELENOIQ9C0D9 397 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 SRD5A3Q9H8P0 318 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 RETNQ9HD89 108 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 ERVK13-1Q9NX77 482 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 TECRQ9NZ01 308 aaKnown RBP6.69□□□□□ -1.34
XRN1-208ENST00000470537 GHRLQ9UBU3 117 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 MGAT4AQ9UM21 535 aa6.69□□□□□ -1.34
XRN1-208ENST00000470537 RPL36Q9Y3U8 105 aaKnown RBP6.69□□□□□ -1.34
XRN1-208ENST00000470537 UBE2QL1A1L167 161 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 H0YJW9 148 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 PDCD6O75340 191 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 CRTAPO75718 401 aaPredicted RBP6.68□□□□□ -1.34
XRN1-208ENST00000470537 APOA2P02652 100 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 MGMTP16455 207 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 ATF4P18848 351 aaPredicted RBP6.68□□□□□ -1.34
XRN1-208ENST00000470537 ZBTB25P24278 435 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 MECP2P51608 486 aaKnown RBP6.68□□□□□ -1.34
XRN1-208ENST00000470537 CBX3Q13185 183 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 GNMTQ14749 295 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 GUCA2BQ16661 112 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 GLT8D1Q68CQ7 371 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 DMKNQ6E0U4 476 aaPredicted RBP6.68□□□□□ -1.34
XRN1-208ENST00000470537 AWAT2Q6E213 333 aa6.68□□□□□ -1.34
XRN1-208ENST00000470537 CEMP1Q6PRD7 247 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms