RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 A0A0B4J203 849 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 OR5H14A6NHG9 310 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 H3BNX3 289 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 SLC22A1O15245 554 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 ZNF780AO75290 641 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-204ENST00000470191 CRTAPO75718 401 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-204ENST00000470191 FASP25445 335 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 MC5RP33032 325 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 HTD2P86397 168 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 ZIK1Q3SY52 487 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-204ENST00000470191 MOGAT2Q3SYC2 334 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 XAF1Q6GPH4 301 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 ZNF343Q6P1L6 599 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 SYS1Q8N2H4 156 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 OR2K2Q8NGT1 345 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 GPR148Q8TDV2 347 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 FAM46BQ96A09 425 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 TSNAXQ99598 290 aaKnown RBP6.86□□□□□ -1.31
CCDC171-204ENST00000470191 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 ERVK13-1Q9NX77 482 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 PIPOXQ9P0Z9 390 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 ABRACLQ9P1F3 81 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 STEAP1Q9UHE8 339 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 OAZ3Q9UMX2 235 aa6.86□□□□□ -1.31
CCDC171-204ENST00000470191 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-204ENST00000470191 A0A1W2PPK0 400 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 RAB29O14966 203 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 RBMXL2O75526 392 aaKnown RBP6.85□□□□□ -1.31
CCDC171-204ENST00000470191 RBBP9O75884 186 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 OR2A4O95047 310 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 PRH1P02810 166 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 IGKV1-16P04430 117 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 MGMTP16455 207 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 FUT3P21217 361 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 AADACP22760 399 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 LGALS7P47929 136 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 MECP2P51608 486 aaKnown RBP6.85□□□□□ -1.31
CCDC171-204ENST00000470191 GPR176Q14439 515 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 AWAT2Q6E213 333 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 SIGIRRQ6IA17 410 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 LYG2Q86SG7 212 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 GAPTQ8N292 157 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 GHSRQ92847 366 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 SNAPC3Q92966 411 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 PHB2Q99623 299 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 GGTLC1Q9BX51 225 aa6.85□□□□□ -1.31
CCDC171-204ENST00000470191 TINAGL1Q9GZM7 467 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-204ENST00000470191 CHMP1AQ9HD42 196 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-204ENST00000470191 MBNL3Q9NUK0 354 aaKnown RBP6.85□□□□□ -1.31
CCDC171-204ENST00000470191 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 TRAV8-7A0A075B6U6 113 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 H3BUA1 57 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 BMPR1BO00238 502 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 GPX5O75715 221 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 SC5DO75845 299 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 HLA-AP01891 365 aaKnown RBP6.84□□□□□ -1.31
CCDC171-204ENST00000470191 SNRPGP62308 76 aaKnown RBP6.84□□□□□ -1.31
CCDC171-204ENST00000470191 SSBP2P81877 361 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-204ENST00000470191 EXOSC2Q13868 293 aaKnown RBP6.84□□□□□ -1.31
CCDC171-204ENST00000470191 DEFB114Q30KQ6 69 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 MEDAGQ5VYS4 303 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 FAM71F2Q6NXP2 309 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 LAX1Q8IWV1 398 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 CCDC197Q8NCU1 140 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 OR52B4Q8NGK2 314 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 OR52I1Q8NGK6 324 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 TRUB1Q8WWH5 349 aaKnown RBP6.84□□□□□ -1.31
CCDC171-204ENST00000470191 CACNG8Q8WXS5 425 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 MYCBPQ99417 103 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-204ENST00000470191 FAAP24Q9BTP7 215 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 OR1A1Q9P1Q5 309 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 AP4S1Q9Y587 144 aa6.84□□□□□ -1.31
CCDC171-204ENST00000470191 LOC102724200A0A096LPH7 203 aaPredicted RBP6.83□□□□□ -1.32
CCDC171-204ENST00000470191 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 SNTNA6NMZ2 147 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 FAM90A23PA8MXZ1 464 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 PPP5D1E7EU14 171 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 MPPED1O15442 326 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 AIREO43918 545 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 PDCD6O75340 191 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 CA11O75493 328 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 SCAF4O95104 1147 aaKnown RBP6.83□□□□□ -1.32
CCDC171-204ENST00000470191 APOA2P02652 100 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 FOLR2P14207 255 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 MRPL28Q13084 256 aaKnown RBP6.83□□□□□ -1.32
CCDC171-204ENST00000470191 HMGN3Q15651 99 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 DEFB135Q30KP9 77 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 DNAL1Q4LDG9 190 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 SLC16A13Q7RTY0 426 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 ZNF383Q8NA42 475 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 OR5AN1Q8NGI8 311 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 Q96M66 194 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 SULT4A1Q9BR01 284 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 CKLFQ9UBR5 152 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 ORC6Q9Y5N6 252 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 KMT2AQ03164 3969 aa6.83□□□□□ -1.32
CCDC171-204ENST00000470191 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
CCDC171-204ENST00000470191 MSGN1A6NI15 193 aa6.82□□□□□ -1.32
CCDC171-204ENST00000470191 C2orf70A6NJV1 201 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms