RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 LHX4Q969G2 390 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 COQ2Q96H96 371 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-209ENST00000470026 SLC39A9Q9NUM3 307 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 NAT8Q9UHE5 227 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 COLQQ9Y215 455 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-209ENST00000470026 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 TMEM250H0YL14 139 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 CDX4O14627 284 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-209ENST00000470026 KBTBD11O94819 623 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 CLDN14O95500 239 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 HBZP02008 142 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 MBP02144 154 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 GRPP07492 148 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 TRGC1P0CF51 173 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 S100A2P29034 98 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 G6PCP35575 357 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 MPV17P39210 176 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 CEBPDP49716 269 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-209ENST00000470026 ELLP55199 621 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-209ENST00000470026 SOX8P57073 446 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 MEF2BQ02080 365 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-209ENST00000470026 PAX5Q02548 391 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 BEND4Q6ZU67 534 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 OR52L2PQ8NGH6 319 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 SSX3Q99909 188 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 TINAGQ9UJW2 476 aa11.44□□□□□ -0.58
BRCA1-209ENST00000470026 FRYLO94915 3013 aa11.43□□□□□ -0.58
BRCA1-209ENST00000470026 DMDP11532 3685 aa11.43□□□□□ -0.58
BRCA1-209ENST00000470026 S1PR2O95136 353 aa11.43□□□□□ -0.58
BRCA1-209ENST00000470026 SOD3P08294 240 aa11.43□□□□□ -0.58
BRCA1-209ENST00000470026 OR8G2PQ6IF36 304 aa11.43□□□□□ -0.58
BRCA1-209ENST00000470026 ACP7Q6ZNF0 438 aa11.43□□□□□ -0.58
BRCA1-209ENST00000470026 KIAA2026Q5HYC2 2103 aa11.43□□□□□ -0.58
BRCA1-209ENST00000470026 C17orf98A8MV24 154 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 PTBP3O95758 552 aaKnown RBP11.42□□□□□ -0.58
BRCA1-209ENST00000470026 KRASP01116 189 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 IGHG3P01860 377 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 PFN1P07737 140 aaKnown RBP11.42□□□□□ -0.58
BRCA1-209ENST00000470026 CD55P08174 381 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 IL2RGP31785 369 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 NKX6-1P78426 367 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-209ENST00000470026 FAM53AQ6NSI3 398 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-209ENST00000470026 ZNF66Q6ZN08 573 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 Q6ZT83 130 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 TMEM178AQ8NBL3 297 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 LOXL4Q96JB6 756 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 LURAP1Q96LR2 239 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 CIB3Q96Q77 187 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-209ENST00000470026 CXXC4Q9H2H0 198 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 TRAV20A0A0B4J274 112 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 ZNF729A6NN14 1252 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-209ENST00000470026 IFNL4K9M1U5 179 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 WNT9BO14905 357 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 PPP1R2P9O14990 202 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 TNFSF15O95150 251 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 TUBG1P23258 451 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 GNB2P62879 340 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 AARDQ4LEZ3 155 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 FAM209BQ5JX69 171 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 Q6ZR03 302 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 TUBG2Q9NRH3 451 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 CLN8Q9UBY8 286 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 LAMP3Q9UQV4 416 aa11.42□□□□□ -0.58
BRCA1-209ENST00000470026 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-209ENST00000470026 A0A1B0GWJ7 208 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 LYZL6O75951 148 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 SP9P0CG40 484 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 COX5AP20674 150 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 KITLGP21583 273 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 AESQ08117 197 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 ZNF816Q0VGE8 651 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-209ENST00000470026 TMEM241Q24JQ0 296 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 GFI1BQ5VTD9 330 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 NCR3LG1Q68D85 454 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 ZNF826PQ6ZT77 177 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 FAM214BQ7L5A3 538 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 WDR31Q8NA23 367 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 OR10P1Q8NGE3 313 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 DTD1Q8TEA8 209 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 TAAR6Q96RI8 345 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 DIRC2Q96SL1 478 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 SMIM7Q9BQ49 75 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 SRD5A3Q9H8P0 318 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 MANBALQ9NQG1 85 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 ZDBF2Q9HCK1 2354 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 GTF3C1Q12789 2109 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 PTPRBP23467 1997 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 IGHV3-64DA0A0J9YX35 117 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 ZG16O60844 167 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 PSMB3P49720 205 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 RPL23P62829 140 aaKnown RBP11.41□□□□□ -0.58
BRCA1-209ENST00000470026 ARG2P78540 354 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 TMEM249Q2WGJ8 235 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 OR2B11Q5JQS5 317 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 WDR82Q6UXN9 313 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 ZNF808Q8N4W9 903 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-209ENST00000470026 Q8N7P7 452 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 C1orf162Q8NEQ5 155 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms