RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 JAGN1Q8N5M9 183 aa14.29□□□□□ -0.12
NCKIPSD-209ENST00000470006 ABHD14BQ96IU4 210 aa14.29□□□□□ -0.12
NCKIPSD-209ENST00000470006 PARP12Q9H0J9 701 aaKnown RBP14.29□□□□□ -0.12
NCKIPSD-209ENST00000470006 GPX5O75715 221 aa14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 CRTAPO75718 401 aaPredicted RBP14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 SC5DO75845 299 aa14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 SLC25A30Q5SVS4 291 aa14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 AWAT2Q6E213 333 aa14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 DRAXINQ8NBI3 349 aaPredicted RBP14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 USMG5Q96IX5 58 aa14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 CYYR1Q96J86 154 aa14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 TINAGL1Q9GZM7 467 aaPredicted RBP14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 CKLFQ9UBR5 152 aa14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 ORC6Q9Y5N6 252 aa14.28□□□□□ -0.12
NCKIPSD-209ENST00000470006 GLAP06280 429 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 MGMTP16455 207 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 SLC16A13Q7RTY0 426 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 CCDC197Q8NCU1 140 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 OR5AN1Q8NGI8 311 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 GGTLC1Q9BX51 225 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 AMBNQ9NP70 447 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 OAZ3Q9UMX2 235 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 AP4S1Q9Y587 144 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 GMPPBQ9Y5P6 360 aa14.27□□□□□ -0.13
NCKIPSD-209ENST00000470006 FAM90A7PA6NKC0 464 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 SAC3D1A6NKF1 404 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 FAM90A23PA8MXZ1 464 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 H3BNX3 289 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 SPDEFO95238 335 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 APELAP0DMC3 54 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 DEFB114Q30KQ6 69 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 RPL22L1Q6P5R6 122 aaKnown RBP14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 SETD6Q8TBK2 473 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 TMEM68Q96MH6 324 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 PHB2Q99623 299 aa14.26□□□□□ -0.13
NCKIPSD-209ENST00000470006 PDCD6O75340 191 aa14.25□□□□□ -0.13
NCKIPSD-209ENST00000470006 NDUFB8O95169 186 aa14.25□□□□□ -0.13
NCKIPSD-209ENST00000470006 IGKV1-16P04430 117 aa14.25□□□□□ -0.13
NCKIPSD-209ENST00000470006 FCGR1AP12314 374 aa14.25□□□□□ -0.13
NCKIPSD-209ENST00000470006 ZIK1Q3SY52 487 aaPredicted RBP14.25□□□□□ -0.13
NCKIPSD-209ENST00000470006 WDR89Q96FK6 387 aaPredicted RBP14.25□□□□□ -0.13
NCKIPSD-209ENST00000470006 CHMP1AQ9HD42 196 aaPredicted RBP14.25□□□□□ -0.13
NCKIPSD-209ENST00000470006 SELENOKQ9Y6D0 94 aa14.25□□□□□ -0.13
NCKIPSD-209ENST00000470006 KIAA1109Q2LD37 5005 aa14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 LOC102724200A0A096LPH7 203 aaPredicted RBP14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 APOA2P02652 100 aa14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 EWSR1Q01844 656 aaKnown RBP eCLIP14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 PJVKQ0ZLH3 352 aa14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 HMGN3Q15651 99 aa14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 SIGIRRQ6IA17 410 aa14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 LYG2Q86SG7 212 aa14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 OR13C5Q8NGS8 318 aa14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 FAM46BQ96A09 425 aa14.24□□□□□ -0.13
NCKIPSD-209ENST00000470006 IGFBP3P17936 291 aaPredicted RBP14.23□□□□□ -0.13
NCKIPSD-209ENST00000470006 XAF1Q6GPH4 301 aa14.23□□□□□ -0.13
NCKIPSD-209ENST00000470006 THRSPQ92748 146 aa14.23□□□□□ -0.13
NCKIPSD-209ENST00000470006 Q96M66 194 aa14.23□□□□□ -0.13
NCKIPSD-209ENST00000470006 NEDD4LQ96PU5 975 aa14.23□□□□□ -0.13
NCKIPSD-209ENST00000470006 BMPR1BO00238 502 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 MPPED1O15442 326 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 FOLR2P14207 255 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 CEACAM6P40199 344 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 KIR2DS2P43631 304 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 LINC00205P59089 165 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 EXOSC2Q13868 293 aaKnown RBP14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 CCDC58Q4VC31 144 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 LGALS9CQ6DKI2 356 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 PDPNQ86YL7 162 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 OR52B4Q8NGK2 314 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 OR52I1Q8NGK6 324 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 CENPNQ96H22 339 aaPredicted RBP14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 Q96MT0 163 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 OR14A2Q96R54 314 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 FAAP24Q9BTP7 215 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 TECRQ9NZ01 308 aaKnown RBP14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 ZNF221Q9UK13 617 aa14.22□□□□□ -0.13
NCKIPSD-209ENST00000470006 TRAV8-7A0A075B6U6 113 aa14.21□□□□□ -0.13
NCKIPSD-209ENST00000470006 A0A1W2PPK0 400 aa14.21□□□□□ -0.13
NCKIPSD-209ENST00000470006 TUSC2O75896 110 aa14.21□□□□□ -0.13
NCKIPSD-209ENST00000470006 ATP5G2Q06055 141 aa14.21□□□□□ -0.13
NCKIPSD-209ENST00000470006 TNFRSF9Q07011 255 aa14.21□□□□□ -0.13
NCKIPSD-209ENST00000470006 ZNF383Q8NA42 475 aa14.21□□□□□ -0.13
NCKIPSD-209ENST00000470006 EDARADDQ8WWZ3 215 aa14.21□□□□□ -0.13
NCKIPSD-209ENST00000470006 SULT4A1Q9BR01 284 aa14.21□□□□□ -0.13
NCKIPSD-209ENST00000470006 C11orf54Q9H0W9 315 aaPredicted RBP14.21□□□□□ -0.13
NCKIPSD-209ENST00000470006 MSGN1A6NI15 193 aa14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 C2orf70A6NJV1 201 aa14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 SPRY2O43597 315 aa14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 RBMXL2O75526 392 aaKnown RBP14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 EDN2P20800 178 aa14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 SSBP2P81877 361 aaPredicted RBP14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 RHOGP84095 191 aa14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 AKIP1Q9NQ31 210 aa14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 ZC4H2Q9NQZ6 224 aa14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 SLC35D1Q9NTN3 355 aa14.2□□□□□ -0.14
NCKIPSD-209ENST00000470006 PRH1P02810 166 aa14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 LIMS3P0CW19 117 aa14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 LIMS4P0CW20 117 aa14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 BMI1P35226 326 aa14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 CAPGP40121 348 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms