RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 MSI2Q96DH6 328 aaKnown RBP6.63□□□□□ -1.35
NPHP3-204ENST00000469232 AJUBAQ96IF1 538 aa6.63□□□□□ -1.35
NPHP3-204ENST00000469232 SUCNR1Q9BXA5 334 aa6.63□□□□□ -1.35
NPHP3-204ENST00000469232 CLEC7AQ9BXN2 247 aa6.63□□□□□ -1.35
NPHP3-204ENST00000469232 SDHAF2Q9NX18 166 aa6.63□□□□□ -1.35
NPHP3-204ENST00000469232 FLNBO75369 2602 aaKnown RBP6.63□□□□□ -1.35
NPHP3-204ENST00000469232 CSMD1Q96PZ7 3565 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 C9orf170A2RU37 121 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 DBX1A6NMT0 343 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 RNASEK-C17orf49H0YIS7 233 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 RAB29O14966 203 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 RBFOX2O43251 390 aaKnown RBP eCLIP6.62□□□□□ -1.35
NPHP3-204ENST00000469232 DUS4LO95620 317 aaKnown RBP6.62□□□□□ -1.35
NPHP3-204ENST00000469232 FSHBP01225 129 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 PGAM2P15259 253 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 F2RP25116 425 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 NFYBP25208 207 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 UCP1P25874 307 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 UBE2E1P51965 193 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 PIGPP57054 158 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 BRWD1-AS2P59051 145 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 FXYD4P59646 89 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 KRTAP1-1Q07627 177 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 ZNF816Q0VGE8 651 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-204ENST00000469232 BAMBIQ13145 260 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 PPP1R1AQ13522 171 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 HABP2Q14520 560 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-204ENST00000469232 LDLRAD2Q5SZI1 272 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 VMO1Q7Z5L0 202 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 LYG2Q86SG7 212 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 CMTM1Q8IZ96 169 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 CCDC71LQ8N9Z2 235 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 OR13D1Q8NGV5 346 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 ZNF431Q8TF32 576 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-204ENST00000469232 MITD1Q8WV92 249 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 SECTM1Q8WVN6 248 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 CAPSLQ8WWF8 208 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 RTN4IP1Q8WWV3 396 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-204ENST00000469232 TOMM40LQ969M1 308 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 ABHD14BQ96IU4 210 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 HSD17B10Q99714 261 aaKnown RBP6.62□□□□□ -1.35
NPHP3-204ENST00000469232 NAA60Q9H7X0 242 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 ONECUT1Q9UBC0 465 aa6.62□□□□□ -1.35
NPHP3-204ENST00000469232 C14orf166Q9Y224 244 aaKnown RBP6.62□□□□□ -1.35
NPHP3-204ENST00000469232 SAA2-SAA4A0A096LPE2 208 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 A0A0A6YYJ9 748 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 A0A1B0GVG6 124 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 OOSP1A8MZH6 123 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 H0Y980 276 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TOX4O94842 621 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 SFT2D2O95562 160 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 RLN1P04808 185 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TRAPPC2P0DI81 140 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TRAPPC2BP0DI82 140 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 SAA2P0DJI9 122 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-204ENST00000469232 PI3P19957 117 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 DUTP33316 252 aaKnown RBP6.61□□□□□ -1.35
NPHP3-204ENST00000469232 PRRX1P54821 245 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 RPL30P62888 115 aaKnown RBP6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TAGLNQ01995 201 aaKnown RBP6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TMEM187Q14656 261 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 MIDNQ504T8 468 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 MINOS1Q5TGZ0 78 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 GLYATL2Q8WU03 294 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 LEAP2Q969E1 77 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 IL22RA2Q969J5 263 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 ADTRPQ96IZ2 230 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TMEM56Q96MV1 263 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 PCGF1Q9BSM1 259 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 OR2D2Q9H210 308 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TBL2Q9Y4P3 447 aaKnown RBP6.61□□□□□ -1.35
NPHP3-204ENST00000469232 ALG5Q9Y673 324 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 MINOS1-NBL1R4GNA1 71 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TMEM56-RWDD3S4R434 201 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 WNK2Q9Y3S1 2297 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 NOTCH2Q04721 2471 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 MYO9AB2RTY4 2548 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 BUB1B-PAK6H3BSN5 160 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 CDS2O95674 445 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 GPR12P47775 334 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 BPIFB3P59826 476 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 LTC4SQ16873 150 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 ZNF585BQ52M93 769 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 PHLDA2Q53GA4 152 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 SPNS3Q6ZMD2 512 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TBC1D26Q86UD7 250 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 SGPP2Q8IWX5 399 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 OR5AN1Q8NGI8 311 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 S1PR3Q99500 378 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 NABP2Q9BQ15 211 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 TMEM222Q9H0R3 208 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 OR51J1Q9H342 316 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 GPN1Q9HCN4 374 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-204ENST00000469232 HIF1ANQ9NWT6 349 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 RNF150Q9ULK6 438 aa6.61□□□□□ -1.35
NPHP3-204ENST00000469232 AMMECR1Q9Y4X0 333 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-204ENST00000469232 FLNAP21333 2647 aaKnown RBP6.6□□□□□ -1.35
NPHP3-204ENST00000469232 TEX15Q9BXT5 2789 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 TEX13DA0A0J9YY54 714 aaPredicted RBP6.6□□□□□ -1.35
NPHP3-204ENST00000469232 CENPVL3A0A0U1RRI6 287 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms