RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SLC25A31Q9H0C2 315 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 SLC25A32Q9H2D1 315 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 SDHAF2Q9NX18 166 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 DCAF16Q9NXF7 216 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 COA4Q9NYJ1 87 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 GAB2Q9UQC2 676 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 PRELID3BQ9Y3B1 194 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 MMP24Q9Y5R2 645 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 NBASA2RRP1 2371 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 BORCS7-ASMTA0A0B4J1R7 106 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 A0A1W2PPH5 198 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 RPS10-NUDT3A0A1W2PQS6 291 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 MSGN1A6NI15 193 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 GPR37O15354 613 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 RBFOX2O43251 390 aaKnown RBP eCLIP7.73□□□□□ -1.171e-7■■■■■ 26.9
SMC1A-205ENST00000469129 ZG16O60844 167 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 EPHA1P21709 976 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 LPAR6P43657 344 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 UQCRFS1P47985 274 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 ARHGDIBP52566 201 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 RPL31P62899 125 aaKnown RBP7.73□□□□□ -1.17
SMC1A-205ENST00000469129 MRPS11P82912 194 aaKnown RBP7.73□□□□□ -1.17
SMC1A-205ENST00000469129 DUX4L9Q6RFH8 374 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-205ENST00000469129 SLC7A5P1Q8MH63 180 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 SPAG16Q8N0X2 631 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 H1FXQ92522 213 aaKnown RBP7.73□□□□□ -1.17
SMC1A-205ENST00000469129 TIMD4Q96H15 378 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 RAB40CQ96S21 281 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 GPHA2Q96T91 129 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 AGMATQ9BSE5 352 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 CACFD1Q9UGQ2 172 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 RNF150Q9ULK6 438 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 HIVEP3Q5T1R4 2406 aa7.73□□□□□ -1.17
SMC1A-205ENST00000469129 DOCK11Q5JSL3 2073 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 FAM90A9PA6NNJ1 464 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 M0R1X1 148 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 RAB29O14966 203 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 SSSCA1O60232 199 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 PITX3O75364 302 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 MED6O75586 246 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 JTBO76095 146 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 SCAF4O95104 1147 aaKnown RBP7.72□□□□□ -1.17
SMC1A-205ENST00000469129 NFYBP25208 207 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 DUTP33316 252 aaKnown RBP7.72□□□□□ -1.17
SMC1A-205ENST00000469129 THBS3P49746 956 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 RPL23AP62750 156 aaKnown RBP7.72□□□□□ -1.17
SMC1A-205ENST00000469129 ID3Q02535 119 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 BAXQ07812 192 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 ZNF585BQ52M93 769 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 C11orf71Q6IPW1 123 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 BTNL3Q6UXE8 466 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 HEPN1Q6WQI6 88 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 TCF23Q7RTU1 214 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 DTX2Q86UW9 622 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 STX12Q86Y82 276 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 TGIF2LYQ8IUE0 185 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 BAP18Q8IXM2 172 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 PDZD9Q8IXQ8 264 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 OR2C3Q8N628 320 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 ZNF439Q8NDP4 499 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 GPR146Q96CH1 333 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 C5orf30Q96GV9 206 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 S1PR3Q99500 378 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 IFI27L2Q9H2X8 130 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 LYRM2Q9NU23 88 aaPredicted RBP7.72□□□□□ -1.17
SMC1A-205ENST00000469129 MED9Q9NWA0 146 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 CACNG5Q9UF02 275 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 FBXL17Q9UF56 701 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 PFDN2Q9UHV9 154 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 RPUSD1Q9UJJ7 312 aaKnown RBP7.72□□□□□ -1.17
SMC1A-205ENST00000469129 RELNP78509 3460 aa7.72□□□□□ -1.17
SMC1A-205ENST00000469129 USF3Q68DE3 2245 aa7.71□□□□□ -1.17
SMC1A-205ENST00000469129 DVL1O14640 695 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 TOR1AO14656 332 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 TNFRSF13BO14836 293 aaPredicted RBP7.71□□□□□ -1.18
SMC1A-205ENST00000469129 LY86O95711 162 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 HPRT1P00492 218 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 IGKV1-39P01597 117 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 IGKV1-5P01602 117 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 IGHV2-70P01814 119 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 IGKV1D-39P04432 117 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 CAV2P51636 162 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 TMEM33P57088 247 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 ERVK-16P61578 105 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 RPL30P62888 115 aaKnown RBP7.71□□□□□ -1.18
SMC1A-205ENST00000469129 ZNF816Q0VGE8 651 aaPredicted RBP7.71□□□□□ -1.18
SMC1A-205ENST00000469129 ZNF266Q14584 549 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 PRAMEF5Q5TYX0 476 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 FAM71F2Q6NXP2 309 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 SLC25A48Q6ZT89 311 aaKnown RBP7.71□□□□□ -1.18
SMC1A-205ENST00000469129 H2BFWTQ7Z2G1 175 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 COMMD7Q86VX2 200 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 C8orf31Q8N9H6 132 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 DMBX1Q8NFW5 382 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 OR4S2Q8NH73 311 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 RAB1CQ92928 201 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 C11orf1Q9H5F2 150 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 C19orf12Q9NSK7 152 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 AUP1Q9Y679 476 aa7.71□□□□□ -1.18
SMC1A-205ENST00000469129 SESN1Q9Y6P5 492 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms