RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 TOLLIPQ9H0E2 274 aa11.45□□□□□ -0.58
SDCCAG3-209ENST00000468963 ALX4Q9H161 411 aaPredicted RBP11.45□□□□□ -0.58
SDCCAG3-209ENST00000468963 OR1A1Q9P1Q5 309 aa11.45□□□□□ -0.58
SDCCAG3-209ENST00000468963 RNF150Q9ULK6 438 aa11.45□□□□□ -0.58
SDCCAG3-209ENST00000468963 GAB2Q9UQC2 676 aa11.45□□□□□ -0.58
SDCCAG3-209ENST00000468963 WASHC3Q9Y3C0 194 aa11.45□□□□□ -0.58
SDCCAG3-209ENST00000468963 TPRKBQ9Y3C4 175 aa11.45□□□□□ -0.58
SDCCAG3-209ENST00000468963 U3KQK5 164 aa11.45□□□□□ -0.58
SDCCAG3-209ENST00000468963 IGKV1-6A0A0C4DH72 117 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 A0A1W2PN81 502 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 RBBP9O75884 186 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 GSTP1P09211 210 aaKnown RBP11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 CPEP16870 476 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 CHRNA7P36544 502 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 LINC00205P59089 165 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 RPS25P62851 125 aaKnown RBP11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 HLA-DRB3P79483 266 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 TMEM267Q0VDI3 215 aaPredicted RBP11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 TRAM1Q15629 374 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 ECSCRQ19T08 205 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 C2orf76Q3KRA6 126 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 AKIRIN2Q53H80 203 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 ZNF562Q6V9R5 426 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 ZNF429Q86V71 674 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 TCTEX1D1Q8N7M0 179 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 EDARADDQ8WWZ3 215 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 DLX4Q92988 240 aaPredicted RBP11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 ARHGAP5-AS1Q96IT6 56 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 PECRQ9BY49 303 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 PLGRKTQ9HBL7 147 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 MGAT4AQ9UM21 535 aa11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 FOXA2Q9Y261 457 aaPredicted RBP11.44□□□□□ -0.58
SDCCAG3-209ENST00000468963 H7C2Y5 167 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 OVOL1O14753 267 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 LDLRAD4O15165 306 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 VEGFCP49767 419 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 AQP4P55087 323 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 PSG5Q15238 335 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 RAB11BQ15907 218 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 PLAC9Q5JTB6 97 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 PPP1R27Q86WC6 154 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 ZNF383Q8NA42 475 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 DRAXINQ8NBI3 349 aaPredicted RBP11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 CASTOR1Q8WTX7 329 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 ASCL2Q99929 193 aa11.43□□□□□ -0.58
SDCCAG3-209ENST00000468963 TRDCB7Z8K6 153 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 LINC01619G3V211 115 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 HSPA12AO43301 675 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 RGS10O43665 173 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 ARL6IP5O75915 188 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 HSMCR30P0CW71 290 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 SLURP1P55000 103 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 CLDN12P56749 244 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 FABP5Q01469 135 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 MLLT11Q13015 90 aaPredicted RBP11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 PLA2G7Q13093 441 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 FAM3DQ96BQ1 224 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 RHOVQ96L33 236 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 CLCC1Q96S66 551 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 C12orf4Q9NQ89 552 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 A3GALT2U3KPV4 340 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
SDCCAG3-209ENST00000468963 IGHV4OR15-8A0A075B7B6 117 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 A0A087WW49 117 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 IGKV1-16P04430 117 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 LGALS1P09382 135 aaKnown RBP11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 CRHBPP24387 322 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 PSMA1P25786 263 aaKnown RBP11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 PLGLAQ15195 96 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 ACTBL2Q562R1 376 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 PYHIN1Q6K0P9 492 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 UNQ5815/PRO19632Q6UWF5 114 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 LFNGQ8NES3 379 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 TSNAXQ99598 290 aaKnown RBP11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 MGLLQ99685 303 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 CMSS1Q9BQ75 279 aaKnown RBP11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 FAM103A1Q9BTL3 118 aaKnown RBP11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 METTL1Q9UBP6 276 aaKnown RBP11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 KCNK7Q9Y2U2 307 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 V9GY05 133 aa11.41□□□□□ -0.58
SDCCAG3-209ENST00000468963 TMEM272A0A1B0GTI8 110 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 CA2P00918 260 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 HSPB1P04792 205 aaKnown RBP11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 CALRP27797 417 aaKnown RBP11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 MAP2K4P45985 399 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 PSMD7P51665 324 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 RPS16P62249 146 aaKnown RBP11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 ACSM6Q6P461 480 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 PRSS48Q7RTY5 328 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 OR56B1Q8NGI3 324 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 MS4A10Q96PG2 267 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 ACOT13Q9NPJ3 140 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 RDH8Q9NYR8 311 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 ZNF221Q9UK13 617 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 RAB22AQ9UL26 194 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 SMAD5-AS1Q9Y6J3 95 aa11.4□□□□□ -0.58
SDCCAG3-209ENST00000468963 TNCP24821 2201 aa11.39□□□□□ -0.59
SDCCAG3-209ENST00000468963 ARPC1BO15143 372 aaKnown RBP11.39□□□□□ -0.59
SDCCAG3-209ENST00000468963 DENRO43583 198 aaKnown RBP11.39□□□□□ -0.59
SDCCAG3-209ENST00000468963 SAP30O75446 220 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms