RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 PRR25Q96S07 402 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 CLCC1Q96S66 551 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 B9D2Q9BPU9 175 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 ACOT13Q9NPJ3 140 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 FOXI3A8MTJ6 420 aaPredicted RBP16.95■□□□□ 0.3
TTC28-204ENST00000468807 IGLV1-40P01703 118 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 OR8U8P0C7N1 319 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 RAB9AP51151 201 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 FHL3Q13643 280 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 MYOZ3Q8TDC0 251 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 CASTOR1Q8WTX7 329 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 AGMATQ9BSE5 352 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 GHITMQ9H3K2 345 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 ZNF221Q9UK13 617 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 FBXO7Q9Y3I1 522 aa16.95■□□□□ 0.3
TTC28-204ENST00000468807 ITGB1BP1O14713 200 aa16.94■□□□□ 0.3
TTC28-204ENST00000468807 RANBP1P43487 201 aa16.94■□□□□ 0.3
TTC28-204ENST00000468807 PSMD7P51665 324 aa16.94■□□□□ 0.3
TTC28-204ENST00000468807 GNB1P62873 340 aa16.94■□□□□ 0.3
TTC28-204ENST00000468807 CX3CL1P78423 397 aa16.94■□□□□ 0.3
TTC28-204ENST00000468807 ZNF616Q08AN1 781 aa16.94■□□□□ 0.3
TTC28-204ENST00000468807 PLA2G7Q13093 441 aa16.94■□□□□ 0.3
TTC28-204ENST00000468807 KIAA0141Q14154 515 aaPredicted RBP16.94■□□□□ 0.3
TTC28-204ENST00000468807 PLAC9Q5JTB6 97 aa16.94■□□□□ 0.3
TTC28-204ENST00000468807 ZNF660Q6AZW8 331 aaPredicted RBP16.94■□□□□ 0.3
TTC28-204ENST00000468807 TMEM272A0A1B0GTI8 110 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 TRDCB7Z8K6 153 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 I3L521 148 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 FCN1O00602 326 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 RBBP9O75884 186 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 ZNF367Q7RTV3 350 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 MINDY2Q8NBR6 621 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 OR5AN1Q8NGI8 311 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 FAM103A1Q9BTL3 118 aaKnown RBP16.93■□□□□ 0.3
TTC28-204ENST00000468807 ALX4Q9H161 411 aaPredicted RBP16.93■□□□□ 0.3
TTC28-204ENST00000468807 RDH8Q9NYR8 311 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 METTL1Q9UBP6 276 aaKnown RBP16.93■□□□□ 0.3
TTC28-204ENST00000468807 RAB22AQ9UL26 194 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 BLOC1S6Q9UL45 172 aa16.93■□□□□ 0.3
TTC28-204ENST00000468807 FOXA2Q9Y261 457 aaPredicted RBP16.93■□□□□ 0.3
TTC28-204ENST00000468807 PDCD5O14737 125 aa16.92■□□□□ 0.3
TTC28-204ENST00000468807 CD3GP09693 182 aa16.92■□□□□ 0.3
TTC28-204ENST00000468807 HSPA13P48723 471 aa16.92■□□□□ 0.3
TTC28-204ENST00000468807 TBCEQ15813 527 aaPredicted RBP16.92■□□□□ 0.3
TTC28-204ENST00000468807 RAB3CQ96E17 227 aa16.92■□□□□ 0.3
TTC28-204ENST00000468807 SCOCQ9UIL1 159 aa16.92■□□□□ 0.3
TTC28-204ENST00000468807 A0A075B6Q4 140 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 IGKV1-6A0A0C4DH72 117 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 BET1O15155 118 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 SOX15O60248 233 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 LY86O95711 162 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 APOA2P02652 100 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 MYL9P24844 172 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 OR10A3P58181 314 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 LINC00205P59089 165 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 RPS16P62249 146 aaKnown RBP16.91■□□□□ 0.3
TTC28-204ENST00000468807 TMEM267Q0VDI3 215 aaPredicted RBP16.91■□□□□ 0.3
TTC28-204ENST00000468807 PSG5Q15238 335 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 ASPHD1Q5U4P2 390 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 PPP1R27Q86WC6 154 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 PTX4Q96A99 478 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 GAB2Q9UQC2 676 aa16.91■□□□□ 0.3
TTC28-204ENST00000468807 ERICH4A6NGS2 130 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 M0R1X1 148 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 LDLRAD4O15165 306 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 CA2P00918 260 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 IGKV1-16P04430 117 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 TFAP2AP05549 437 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 RUNX1Q01196 453 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 SSX1Q16384 188 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 MOGAT2Q3SYC2 334 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 ACTBL2Q562R1 376 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 UNQ5815/PRO19632Q6UWF5 114 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 TCTEX1D1Q8N7M0 179 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 ZNF383Q8NA42 475 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 TSNAXQ99598 290 aaKnown RBP16.9■□□□□ 0.3
TTC28-204ENST00000468807 RNF5Q99942 180 aa16.9■□□□□ 0.3
TTC28-204ENST00000468807 FABP7O15540 132 aa16.89■□□□□ 0.29
TTC28-204ENST00000468807 SNRPBP14678 240 aaKnown RBP16.89■□□□□ 0.29
TTC28-204ENST00000468807 GNB3P16520 340 aa16.89■□□□□ 0.29
TTC28-204ENST00000468807 GADD45AP24522 165 aa16.89■□□□□ 0.29
TTC28-204ENST00000468807 SERPINB10P48595 397 aa16.89■□□□□ 0.29
TTC28-204ENST00000468807 LFNGQ8NES3 379 aa16.89■□□□□ 0.29
TTC28-204ENST00000468807 OR4A4PQ8NGN8 299 aa16.89■□□□□ 0.29
TTC28-204ENST00000468807 MAFIPQ8WZ33 124 aa16.89■□□□□ 0.29
TTC28-204ENST00000468807 DCUN1D4Q92564 292 aa16.89■□□□□ 0.29
TTC28-204ENST00000468807 MS4A10Q96PG2 267 aa16.89■□□□□ 0.29
TTC28-204ENST00000468807 KMT2CQ8NEZ4 4911 aaKnown RBP16.89■□□□□ 0.29
TTC28-204ENST00000468807 OVOL1O14753 267 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 SLC25A17O43808 307 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 PROP1O75360 226 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 IGHV3-11P01762 117 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 FCGR3AP08637 254 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 OR8U9P0C7N5 309 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 EGR2P11161 476 aaPredicted RBP16.88■□□□□ 0.29
TTC28-204ENST00000468807 CD40LGP29965 261 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 CRIP2P52943 208 aaPredicted RBP16.88■□□□□ 0.29
TTC28-204ENST00000468807 SLURP1P55000 103 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 C19orf54Q5BKX5 351 aa16.88■□□□□ 0.29
TTC28-204ENST00000468807 IGSF11Q5DX21 431 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms