RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 WIPF2Q8TF74 440 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-206ENST00000468253 OR2W1Q9Y3N9 320 aa15.91■□□□□ 0.14
NPHP4-206ENST00000468253 NOL3O60936 208 aaKnown RBP15.9■□□□□ 0.14
NPHP4-206ENST00000468253 RBBP9O75884 186 aa15.9■□□□□ 0.14
NPHP4-206ENST00000468253 NAT1P18440 290 aa15.9■□□□□ 0.14
NPHP4-206ENST00000468253 GVQW1Q8N7I0 195 aa15.9■□□□□ 0.14
NPHP4-206ENST00000468253 Q8N9W7 124 aa15.9■□□□□ 0.14
NPHP4-206ENST00000468253 DYNC2LI1Q8TCX1 351 aa15.9■□□□□ 0.14
NPHP4-206ENST00000468253 SCPEP1Q9HB40 452 aa15.9■□□□□ 0.14
NPHP4-206ENST00000468253 LIN7CQ9NUP9 197 aaKnown RBP15.9■□□□□ 0.14
NPHP4-206ENST00000468253 ANAPC10Q9UM13 185 aa15.9■□□□□ 0.14
NPHP4-206ENST00000468253 CEPT1Q9Y6K0 416 aa15.9■□□□□ 0.14
NPHP4-206ENST00000468253 H0YJW9 148 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 SULT1C2O00338 296 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 TUSC2O75896 110 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 IGHG2P01859 326 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 LUMP51884 338 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-206ENST00000468253 F2RL1P55085 397 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 SRSF4Q08170 494 aaKnown RBP15.89■□□□□ 0.13
NPHP4-206ENST00000468253 ARSJQ5FYB0 599 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-206ENST00000468253 KLHDC1Q8N7A1 406 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 NPBQ8NG41 125 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 OR5AP2Q8NGF4 316 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 C15orf40Q8WUR7 153 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 ISOC1Q96CN7 298 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 RASL11BQ9BPW5 248 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 SDHAF2Q9NX18 166 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 CCDC59Q9P031 241 aaKnown RBP15.89■□□□□ 0.13
NPHP4-206ENST00000468253 ADAM30Q9UKF2 790 aa15.89■□□□□ 0.13
NPHP4-206ENST00000468253 RBM7Q9Y580 266 aaKnown RBP15.89■□□□□ 0.13
NPHP4-206ENST00000468253 PEX14O75381 377 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 VSIG10L2P0DP72 767 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 PTHLHP12272 177 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 ARPC4P59998 168 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 ACTBP60709 375 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 FAM71E2Q8N5Q1 922 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 GPX8Q8TED1 209 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 GIMAP1Q8WWP7 306 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 OR2D2Q9H210 308 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 NECAP2Q9NVZ3 263 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 MRPS7Q9Y2R9 242 aaKnown RBP15.88■□□□□ 0.13
NPHP4-206ENST00000468253 WASHC3Q9Y3C0 194 aa15.88■□□□□ 0.13
NPHP4-206ENST00000468253 FAM25AB3EWG3 89 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 FAM25CB3EWG5 89 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 FAM25GB3EWG6 89 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 H3BMQ9 156 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 NFYAP23511 347 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-206ENST00000468253 ZNF383Q8NA42 475 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 SNAPC3Q92966 411 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 ADTRPQ96IZ2 230 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 RITA1Q96K30 269 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 IFT46Q9NQC8 304 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 TRRAPQ9Y4A5 3859 aa15.87■□□□□ 0.13
NPHP4-206ENST00000468253 M0R1X1 148 aa15.86■□□□□ 0.13
NPHP4-206ENST00000468253 OR5H8P0DN80 308 aa15.86■□□□□ 0.13
NPHP4-206ENST00000468253 CDK10Q15131 360 aa15.86■□□□□ 0.13
NPHP4-206ENST00000468253 MSMO1Q15800 293 aa15.86■□□□□ 0.13
NPHP4-206ENST00000468253 C9orf152Q5JTZ5 239 aa15.86■□□□□ 0.13
NPHP4-206ENST00000468253 DHRS11Q6UWP2 260 aa15.86■□□□□ 0.13
NPHP4-206ENST00000468253 FAM131AQ6UXB0 335 aa15.86■□□□□ 0.13
NPHP4-206ENST00000468253 CENPVQ7Z7K6 275 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-206ENST00000468253 SH2D7A6NKC9 451 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-206ENST00000468253 ZNF701M0R085 212 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-206ENST00000468253 KCNAB3O43448 404 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 NDUFA3O95167 84 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 APOA2P02652 100 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 RRASP10301 218 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 THBS3P49746 956 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 MMDQ15546 238 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 PRR31Q5SQ13 230 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 GLDNQ6ZMI3 551 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-206ENST00000468253 OVCH2Q7RTZ1 564 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 PDPNQ86YL7 162 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 ZNF645Q8N7E2 425 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 DRAXINQ8NBI3 349 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-206ENST00000468253 RABL2AQ9UBK7 228 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-206ENST00000468253 RABL2BQ9UNT1 228 aa15.85■□□□□ 0.13
NPHP4-206ENST00000468253 H7C2Y5 167 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 CTDSP2O14595 271 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 NBR2O15453 112 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 FCGR2CP31995 323 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 LGALS7P47929 136 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 TAS2R46P59540 309 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 C5orf64Q2M2E5 130 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 SLC35E3Q7Z769 313 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 LYSMD2Q8IV50 215 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 OR5AU1Q8NGC0 362 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 CHPT1Q8WUD6 406 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 FLYWCH2Q96CP2 140 aaKnown RBP15.84■□□□□ 0.13
NPHP4-206ENST00000468253 MIXL1Q9H2W2 232 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 KIAA1456Q9P272 454 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 ZNF580Q9UK33 172 aa15.84■□□□□ 0.13
NPHP4-206ENST00000468253 M0QZ24 198 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 AP4M1O00189 453 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 DUTP33316 252 aaKnown RBP15.83■□□□□ 0.12
NPHP4-206ENST00000468253 LINC00205P59089 165 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 DYRK1AQ13627 763 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 TMEM95Q3KNT9 176 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 LIN54Q6MZP7 749 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 SNX29P2Q8IUI4 249 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms