RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 H0YIZ8 118 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 GPR37O15354 613 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 VDAC1P21796 283 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 S100A10P60903 97 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 FOXRED2Q8IWF2 684 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 HSD17B10Q99714 261 aaKnown RBP16.89■□□□□ 0.29
TMEM53-207ENST00000468117 PATZ1Q9HBE1 687 aaKnown RBP16.89■□□□□ 0.29
TMEM53-207ENST00000468117 MED13LQ71F56 2210 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 MAP1AP78559 2803 aaPredicted RBP16.89■□□□□ 0.29
TMEM53-207ENST00000468117 SAA2-SAA4A0A096LPE2 208 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 DUXBA0A1W2PPF3 345 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 C17orf98A8MV24 154 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 IGHV4-39P01824 125 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 SAA2P0DJI9 122 aaPredicted RBP16.88■□□□□ 0.29
TMEM53-207ENST00000468117 SLC25A4P12235 298 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 BRWD1-AS2P59051 145 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 NMSQ5H8A3 153 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 ZNF66Q6ZN08 573 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 LYG1Q8N1E2 194 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 RNF126Q9BV68 326 aa16.88■□□□□ 0.29
TMEM53-207ENST00000468117 M0R1X1 148 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 TSC22D2O75157 780 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 SCGB1D2O95969 90 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 DUTP33316 252 aaKnown RBP16.87■□□□□ 0.29
TMEM53-207ENST00000468117 GNB2P62879 340 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 SLC25A48Q6ZT89 311 aaKnown RBP16.87■□□□□ 0.29
TMEM53-207ENST00000468117 ODF3L1Q8IXM7 274 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 SPAG16Q8N0X2 631 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 C11orf42Q8N5U0 333 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 FBN2P35556 2912 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 CSMD2Q7Z408 3487 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 A0A0G2JRQ6 117 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 L7N2F9 121 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 KCNAB3O43448 404 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 LPAR6P43657 344 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 OR5AC2Q9NZP5 309 aa16.87■□□□□ 0.29
TMEM53-207ENST00000468117 PPIAL4CA0A0B4J2A2 164 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 RAB29O14966 203 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 PPIAL4GP0DN37 164 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 AP2S1P53680 142 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-207ENST00000468117 ZNF816Q0VGE8 651 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-207ENST00000468117 NCR3LG1Q68D85 454 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 TMEM65Q6PI78 240 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 MFFQ9GZY8 342 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 TNFSF18Q9UNG2 199 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 WNK2Q9Y3S1 2297 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 IGHV1-8P0DP01 117 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 IZUMO4Q1ZYL8 232 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 ZNF251Q9BRH9 671 aa16.86■□□□□ 0.29
TMEM53-207ENST00000468117 SSBP3Q9BWW4 388 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-207ENST00000468117 C22orf46C9J442 243 aa16.85■□□□□ 0.29
TMEM53-207ENST00000468117 F5H0A9 414 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-207ENST00000468117 IGKV1-5P01602 117 aa16.85■□□□□ 0.29
TMEM53-207ENST00000468117 MBPP02686 304 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-207ENST00000468117 RPA2P15927 270 aa16.85■□□□□ 0.29
TMEM53-207ENST00000468117 AKR1C2P52895 323 aa16.85■□□□□ 0.29
TMEM53-207ENST00000468117 PRSS54Q6PEW0 395 aa16.85■□□□□ 0.29
TMEM53-207ENST00000468117 RNASE11Q8TAA1 199 aaKnown RBP16.85■□□□□ 0.29
TMEM53-207ENST00000468117 C8orf46Q8TAG6 207 aa16.85■□□□□ 0.29
TMEM53-207ENST00000468117 DCUN1D4Q92564 292 aa16.85■□□□□ 0.29
TMEM53-207ENST00000468117 RAB39BQ96DA2 213 aa16.85■□□□□ 0.29
TMEM53-207ENST00000468117 GAB2Q9UQC2 676 aa16.85■□□□□ 0.29
TMEM53-207ENST00000468117 LSM5Q9Y4Y9 91 aaKnown RBP16.85■□□□□ 0.29
TMEM53-207ENST00000468117 CLEC18AA5D8T8 446 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 EPHA1P21709 976 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 COL8A1P27658 744 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 DLX1P56177 255 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 CLEC18CQ8NCF0 446 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 OR4D5Q8NGN0 318 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 OR1S1Q8NH92 325 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 NRGNQ92686 78 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 GPR146Q96CH1 333 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 SPIN2AQ99865 258 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 SPIN2BQ9BPZ2 258 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 BPESC1Q9GZL8 116 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 DOPEY2Q9Y3R5 2298 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 HELZ2Q9BYK8 2649 aaKnown RBP16.84■□□□□ 0.29
TMEM53-207ENST00000468117 PIGBOS1A0A0B4J2F0 54 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 S1PR2O95136 353 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 PET100P0DJ07 73 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 PLA2G2AP14555 144 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 ZNF295-AS1Q8N0V1 137 aa16.84■□□□□ 0.29
TMEM53-207ENST00000468117 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-207ENST00000468117 RNF222A6NCQ9 220 aa16.83■□□□□ 0.28
TMEM53-207ENST00000468117 ESCO2Q56NI9 601 aa16.83■□□□□ 0.28
TMEM53-207ENST00000468117 THOC7Q6I9Y2 204 aaKnown RBP16.83■□□□□ 0.28
TMEM53-207ENST00000468117 TMUB2Q71RG4 321 aa16.83■□□□□ 0.28
TMEM53-207ENST00000468117 TCTEX1D1Q8N7M0 179 aa16.83■□□□□ 0.28
TMEM53-207ENST00000468117 ARL6Q9H0F7 186 aa16.83■□□□□ 0.28
TMEM53-207ENST00000468117 ANKRD17O75179 2603 aaKnown RBP16.83■□□□□ 0.28
TMEM53-207ENST00000468117 A0A1W2PPH5 198 aa16.82■□□□□ 0.28
TMEM53-207ENST00000468117 FCGR3BO75015 233 aa16.82■□□□□ 0.28
TMEM53-207ENST00000468117 KRASP01116 189 aa16.82■□□□□ 0.28
TMEM53-207ENST00000468117 LYL1P12980 280 aa16.82■□□□□ 0.28
TMEM53-207ENST00000468117 S100A11P31949 105 aa16.82■□□□□ 0.28
TMEM53-207ENST00000468117 PRB3Q04118 309 aaPredicted RBP16.82■□□□□ 0.28
TMEM53-207ENST00000468117 Q6ZRM9 215 aa16.82■□□□□ 0.28
TMEM53-207ENST00000468117 LY6G5BQ8NDX9 201 aa16.82■□□□□ 0.28
TMEM53-207ENST00000468117 LSM10Q969L4 123 aaKnown RBP16.82■□□□□ 0.28
TMEM53-207ENST00000468117 RRNAD1Q96FB5 475 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms