RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ZNF251Q9BRH9 671 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 C7orf50Q9BRJ6 194 aaKnown RBP12.28□□□□□ -0.44
SNIP1-202ENST00000468040 SLC5A7Q9GZV3 580 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 HRASLSQ9HDD0 168 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 ABCB10Q9NRK6 738 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 SDHAF2Q9NX18 166 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 SCP2D1Q9UJQ7 156 aa12.28□□□□□ -0.44
SNIP1-202ENST00000468040 IGHV1-3A0A0C4DH29 117 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 NAP1L6A6NFF2 107 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 UPK1BO75841 260 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 UCP3P55916 312 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 DIAPH2-AS1Q14236 149 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 LRRC75BQ2VPJ9 315 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 RPL39P5Q59GN2 51 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 SIGLECL1Q8N7X8 197 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 ZBTB34Q8NCN2 500 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 OR51S1Q8NGJ8 323 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 AKR1E2Q96JD6 320 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 FXYD6Q9H0Q3 95 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 DPAGT1Q9H3H5 408 aa12.27□□□□□ -0.45
SNIP1-202ENST00000468040 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 OR5H14A6NHG9 310 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 M0R1X1 148 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 TIMM23O14925 209 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 IDO2Q6ZQW0 420 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 MOB3BQ86TA1 216 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 SLC38A6Q8IZM9 456 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 DRAM1Q8N682 238 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 OR5R1Q8NH85 324 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 SSMEM1Q8WWF3 244 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 ADTRPQ96IZ2 230 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 SSX3Q99909 188 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 CCL28Q9NRJ3 127 aa12.26□□□□□ -0.45
SNIP1-202ENST00000468040 FN1P02751 2386 aaKnown RBP12.26□□□□□ -0.45
SNIP1-202ENST00000468040 NSD1Q96L73 2696 aaPredicted RBP12.25□□□□□ -0.45
SNIP1-202ENST00000468040 LINC00854A0A1B0GVQ3 168 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 PROP1O75360 226 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 IGLV2-14P01704 120 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 PAX6P26367 422 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 S100GP29377 79 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 IER3P46695 156 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 THBS3P49746 956 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 HABP2Q14520 560 aaPredicted RBP12.25□□□□□ -0.45
SNIP1-202ENST00000468040 SURF2Q15527 256 aaPredicted RBP12.25□□□□□ -0.45
SNIP1-202ENST00000468040 CMTM1Q8IZ96 169 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 JMJD8Q96S16 334 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 HSD17B10Q99714 261 aaKnown RBP12.25□□□□□ -0.45
SNIP1-202ENST00000468040 NABP2Q9BQ15 211 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 MRPL20Q9BYC9 149 aaKnown RBP12.25□□□□□ -0.45
SNIP1-202ENST00000468040 POMT1Q9Y6A1 747 aa12.25□□□□□ -0.45
SNIP1-202ENST00000468040 A0A0A6YYJ9 748 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 H3BUX3 64 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 GPR31O00270 319 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 FAM106CPP0CH98 169 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 CT45A6P0DMU7 189 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 CT45A5P0DMU8 189 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 CT45A7P0DMV0 189 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 PGAM2P15259 253 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 GNRHRP30968 328 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 MC5RP33032 325 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 TAGLNQ01995 201 aaKnown RBP12.24□□□□□ -0.45
SNIP1-202ENST00000468040 BAMBIQ13145 260 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 SVEP1Q4LDE5 3571 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 ZNF66Q6ZN08 573 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 ZNF818PQ6ZRF7 136 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 BVESQ8NE79 360 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 ZFAND1Q8TCF1 268 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 CFHR4Q92496 578 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 C5orf30Q96GV9 206 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 ZNF486Q96H40 463 aaPredicted RBP12.24□□□□□ -0.45
SNIP1-202ENST00000468040 SCGB3A2Q96PL1 93 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 RSRP1Q9BUV0 290 aa12.24□□□□□ -0.45
SNIP1-202ENST00000468040 LYRM1O43325 122 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 HOXA3O43365 443 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-202ENST00000468040 IFNA2P01563 188 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 IGHV4-59P01825 116 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 APOA2P02652 100 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 CD1BP29016 333 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 DUTP33316 252 aaKnown RBP12.23□□□□□ -0.45
SNIP1-202ENST00000468040 RAB13P51153 203 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 HILS1P60008 231 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 CATR1Q13166 79 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 THNSL2Q86YJ6 484 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 DRAXINQ8NBI3 349 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-202ENST00000468040 OR5AN1Q8NGI8 311 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 OR13C8Q8NGS7 320 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 MARCH1Q8TCQ1 289 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 CAPSLQ8WWF8 208 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 SLC25A21Q9BQT8 299 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-202ENST00000468040 PITPNC1Q9UKF7 332 aa12.23□□□□□ -0.45
SNIP1-202ENST00000468040 ANK3Q12955 4377 aaKnown RBP12.22□□□□□ -0.45
SNIP1-202ENST00000468040 IGHV3-72A0A0B4J1Y9 119 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 FAM90A9PA6NNJ1 464 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 RNF212BA8MTL3 300 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 H0YJW9 148 aa12.22□□□□□ -0.45
SNIP1-202ENST00000468040 CLDN34H7C241 214 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms