RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	CT45A3	Q8NHU0	189 aa		10.12	□□□□□ -0.79
HDLBP-231	ENST00000467435	LSM10	Q969L4	123 aa	Known RBP	10.12	□□□□□ -0.79
HDLBP-231	ENST00000467435	NEIL1	Q96FI4	390 aa	Predicted RBP	10.12	□□□□□ -0.79
HDLBP-231	ENST00000467435	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.12	□□□□□ -0.79
HDLBP-231	ENST00000467435	MIOX	Q9UGB7	285 aa		10.12	□□□□□ -0.79
HDLBP-231	ENST00000467435	RCL1	Q9Y2P8	373 aa	Known RBP	10.12	□□□□□ -0.79
HDLBP-231	ENST00000467435	POMT1	Q9Y6A1	747 aa		10.12	□□□□□ -0.79
HDLBP-231	ENST00000467435	SAA2-SAA4	A0A096LPE2	208 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435		A0A0G2JRQ6	117 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	LINC00473	A8K010	186 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	C17orf98	A8MV24	154 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	ST8SIA3	O43173	380 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	KCNAB3	O43448	404 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	RAMP3	O60896	148 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	IGKV1-5	P01602	117 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	SAA2	P0DJI9	122 aa	Predicted RBP	10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	SLC25A6	P12236	298 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	DUT	P33316	252 aa	Known RBP	10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	NKX2-1	P43699	371 aa	Predicted RBP	10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	DLX6	P56179	175 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	TLE4	Q04727	773 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	RPL39P5	Q59GN2	51 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	TEX261	Q6UWH6	196 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	ZNF841	Q6ZN19	808 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	LYG1	Q8N1E2	194 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	GPR146	Q96CH1	333 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	RAB39B	Q96DA2	213 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	RRNAD1	Q96FB5	475 aa	Known RBP	10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	AQP10	Q96PS8	301 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	GAB2	Q9UQC2	676 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435		U3KQ87	197 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	RELN	P78509	3460 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	IGSF10	Q6WRI0	2623 aa		10.11	□□□□□ -0.79
HDLBP-231	ENST00000467435	ADGRG4	Q8IZF6	3080 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	MSGN1	A6NI15	193 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435		E5RGE8	158 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	RAB29	O14966	203 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	GPR37	O15354	613 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	S1PR2	O95136	353 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	EFNA4	P52798	201 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	ERVFRD-1	P60508	538 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	EXOSC2	Q13868	293 aa	Known RBP	10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	SLC25A48	Q6ZT89	311 aa	Known RBP	10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	ODF3L1	Q8IXM7	274 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	ARPC5L	Q9BPX5	153 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	SPOCK3	Q9BQ16	436 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435	NSG2	Q9Y328	171 aa		10.1	□□□□□ -0.79
HDLBP-231	ENST00000467435		A0A1B0GU03	582 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	FCGR3B	O75015	233 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	NDUFS7	O75251	213 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	PROP1	O75360	226 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	ATG12	O94817	140 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	NXPH3	O95157	252 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	F12	P00748	615 aa	Predicted RBP	10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	IFNA7	P01567	189 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	HKR1	P10072	659 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	KIR2DS2	P43631	304 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	GPR6	P46095	362 aa	Predicted RBP	10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	THBS3	P49746	956 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	BRWD1-AS2	P59051	145 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	LINC00205	P59089	165 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	UBA52	P62987	128 aa	Known RBP	10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	WDR25	Q64LD2	544 aa	Predicted RBP	10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	NCR3LG1	Q68D85	454 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	SLC51B	Q86UW2	128 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	ZNF680	Q8NEM1	530 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	ZC4H2	Q9NQZ6	224 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	CACNG5	Q9UF02	275 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	MMP24	Q9Y5R2	645 aa		10.09	□□□□□ -0.79
HDLBP-231	ENST00000467435	KALRN	O60229	2985 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435		A0A1W2PPH5	198 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435		F5H0A9	414 aa	Predicted RBP	10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	WRB	O00258	174 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	SSSCA1	O60232	199 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	PITX3	O75364	302 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	SPDEF	O95238	335 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	CFD	P00746	253 aa	Predicted RBP	10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	PVALB	P20472	110 aa	Predicted RBP	10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	G6PC	P35575	357 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	TMEM33	P57088	247 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	POLR2G	P62487	172 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	GNB2	P62879	340 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	IZUMO4	Q1ZYL8	232 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	DMBX1	Q8NFW5	382 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	C8orf46	Q8TAG6	207 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	CD300LF	Q8TDQ1	290 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	DDB2	Q92466	427 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	ADTRP	Q96IZ2	230 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	S1PR3	Q99500	378 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	ZNF251	Q9BRH9	671 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	ZNF471	Q9BX82	626 aa	Predicted RBP	10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	MAGT1	Q9H0U3	335 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	NARFL	Q9H6Q4	476 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	PLEKHA2	Q9HB19	425 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	PATZ1	Q9HBE1	687 aa	Known RBP	10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	ZNRD1	Q9P1U0	126 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms