RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 INTS1Q8N201 2190 aaKnown RBP0.81□□□□□ -2.28
SMC4-207ENST00000467263 BAZ2BQ9UIF8 2168 aaKnown RBP0.81□□□□□ -2.28
SMC4-207ENST00000467263 IGKV2-40A0A087WW87 121 aaPredicted RBP0.81□□□□□ -2.28
SMC4-207ENST00000467263 TRGV5A0A0B4J1U4 118 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 TRBV6-5A0A0K0K1A5 114 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 SULT1C2O00338 296 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 PHYHO14832 338 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 UBE2L6O14933 153 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 TNFAIP8O95379 198 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 PSMG1O95456 288 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 IGKV2D-40P01614 121 aaPredicted RBP0.81□□□□□ -2.28
SMC4-207ENST00000467263 IGLV3-27P01718 113 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 CRYBA1P05813 215 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 CCDC172P0C7W6 258 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 LCN1P31025 176 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 TMEM258P61165 79 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 GLO1Q04760 184 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 TBC1D28Q2M2D7 210 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 TMEM155Q4W5P6 130 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 OR51H1Q8NH63 302 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 TNFAIP8L1Q8WVP5 186 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 ASB17Q8WXJ9 295 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 ACY3Q96HD9 319 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 Q96M85 177 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 SLC2A9Q9NRM0 540 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 POFUT2Q9Y2G5 429 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 SNX10Q9Y5X0 201 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 WDR90Q96KV7 1748 aa0.81□□□□□ -2.28
SMC4-207ENST00000467263 DIDO1Q9BTC0 2240 aaKnown RBP0.8□□□□□ -2.28
SMC4-207ENST00000467263 IGKV3D-7A0A0C4DH55 119 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 IGKV3OR2-268A0A0C4DH90 116 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 ZNF737O75373 536 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 HSPA9P38646 679 aaKnown RBP0.8□□□□□ -2.28
SMC4-207ENST00000467263 CDK9P50750 372 aaKnown RBP0.8□□□□□ -2.28
SMC4-207ENST00000467263 STX3Q13277 289 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 RPS4Y2Q8TD47 263 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 MSANTD3Q96H12 275 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 C8orf4Q9NR00 106 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 GLS2Q9UI32 602 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 STK38LQ9Y2H1 464 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 CLUHO75153 1309 aa0.8□□□□□ -2.28
SMC4-207ENST00000467263 MICAL3Q7RTP6 2002 aa0.79□□□□□ -2.28
SMC4-207ENST00000467263 GPX2P18283 190 aa0.79□□□□□ -2.28
SMC4-207ENST00000467263 TAS2R30P59541 319 aa0.79□□□□□ -2.28
SMC4-207ENST00000467263 TMEM249Q2WGJ8 235 aa0.79□□□□□ -2.28
SMC4-207ENST00000467263 MESTQ5EB52 335 aa0.79□□□□□ -2.28
SMC4-207ENST00000467263 CCDC12Q8WUD4 166 aaPredicted RBP0.79□□□□□ -2.28
SMC4-207ENST00000467263 SERPINB11Q96P15 392 aa0.79□□□□□ -2.28
SMC4-207ENST00000467263 MS4A12Q9NXJ0 267 aa0.79□□□□□ -2.28
SMC4-207ENST00000467263 KIAA0232Q92628 1395 aa0.79□□□□□ -2.28
SMC4-207ENST00000467263 BHLHE40O14503 412 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 UGT2B11O75310 529 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 ARL6IP5O75915 188 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 SLC35E2BP0CK96 405 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 CD24P25063 80 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 AGTR1P30556 359 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 STC1P52823 247 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 RAB8AP61006 207 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 HERVK_113P63121 156 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 OR10K2Q6IF99 312 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 UNQ6190/PRO20217Q6UXQ8 127 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 NATD1Q8N6N6 113 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 CLDND2Q8NHS1 167 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 CCDC124Q96CT7 223 aaKnown RBP0.78□□□□□ -2.28
SMC4-207ENST00000467263 HBEGFQ99075 208 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 UGT2B28Q9BY64 529 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 GNB1LQ9BYB4 327 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 NKX6-2Q9C056 277 aaPredicted RBP0.78□□□□□ -2.28
SMC4-207ENST00000467263 VCX3BQ9H321 246 aa0.78□□□□□ -2.28
SMC4-207ENST00000467263 CHD5Q8TDI0 1954 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 TXNDC9O14530 226 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 MRASO14807 208 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 GSTZ1O43708 216 aaPredicted RBP0.77□□□□□ -2.29
SMC4-207ENST00000467263 UCHL1P09936 223 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 CCR2P41597 374 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 CA7P43166 264 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 CTBP2P56545 445 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 OR4D1Q15615 310 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 NNATQ16517 81 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 SLC36A2Q495M3 483 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 SPATA31B1PQ5VZV4 182 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 TMEM42Q69YG0 159 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 ATP5L2Q7Z4Y8 100 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 DAND5Q8N907 189 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 OR2D3Q8NGH3 330 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 OR51T1Q8NGJ9 327 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 SMCR5Q8TEV8 140 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 RORBQ92753 470 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 OR51B6Q9H340 312 aa0.77□□□□□ -2.29
SMC4-207ENST00000467263 IGKV3-7A0A075B6H7 116 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 IGHV3-64A0A075B6Q5 118 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 LIN7AO14910 233 aaPredicted RBP0.76□□□□□ -2.29
SMC4-207ENST00000467263 MPZL2O60487 215 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 FADS2O95864 444 aaKnown RBP0.76□□□□□ -2.29
SMC4-207ENST00000467263 HBZP02008 142 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 CRPP02741 224 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 GP1BAP07359 652 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 OR10J1P30954 320 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 SCGB1D4Q6XE38 83 aa0.76□□□□□ -2.29
SMC4-207ENST00000467263 SPATA12Q7Z6I5 190 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms