RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 TRAV41A0A0B4J266 112 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 SHISA3A0PJX4 238 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 C15orf65H3BRN8 121 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 HLA-DQB1P01920 261 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 ISG15P05161 165 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
CXCR4-203ENST00000466288 TMEM225BP0DP42 221 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 ARSBP15848 533 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 GZMHP20718 246 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 IL3RAP26951 378 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 KCNJ3P48549 501 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 ZNF137PP52743 207 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 ELP2Q6IA86 826 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 OR10AC1Q8NH08 325 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 C15orf40Q8WUR7 153 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 LINC00476Q8WZB0 136 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 DERL3Q96Q80 235 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 SDHCQ99643 169 aaPredicted RBP11.08□□□□□ -0.64
CXCR4-203ENST00000466288 PARP11Q9NR21 331 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 GFOD1Q9NXC2 390 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 FRRS1LQ9P0K9 344 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 COMMD3Q9UBI1 195 aa11.08□□□□□ -0.64
CXCR4-203ENST00000466288 MRPS28Q9Y2Q9 187 aaKnown RBP11.08□□□□□ -0.64
CXCR4-203ENST00000466288 IGHV7-81A0A0B4J1V7 117 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 SDCBPO00560 298 aaPredicted RBP11.07□□□□□ -0.64
CXCR4-203ENST00000466288 SLC31A2O15432 143 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 SOX15O60248 233 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 HLA-DRB1P01911 266 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 BCAP31P51572 246 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 NANOS3P60323 173 aaKnown RBP11.07□□□□□ -0.64
CXCR4-203ENST00000466288 ASAH1Q13510 395 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 MMDQ15546 238 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 ZNF79Q15937 498 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 IDNKQ5T6J7 187 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 CNIH2Q6PI25 160 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 OR51A4Q8NGJ6 313 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 UBALD1Q8TB05 177 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 PDCD1LG2Q9BQ51 273 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 RETNQ9HD89 108 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 ZNF581Q9P0T4 197 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 SPATA2Q9UM82 520 aa11.07□□□□□ -0.64
CXCR4-203ENST00000466288 TRBV5-7A0A0A0MS05 114 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 IGHV3-43A0A0B4J1X8 118 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 TXNL1O43396 289 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 IGHV3-43DP0DP04 118 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 IL7P13232 177 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 BLVRBP30043 206 aaPredicted RBP11.06□□□□□ -0.64
CXCR4-203ENST00000466288 IL13RA2Q14627 380 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 INSL4Q14641 139 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 KISS1Q15726 138 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 C19orf54Q5BKX5 351 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 SLC25A48Q6ZT89 311 aaKnown RBP11.06□□□□□ -0.64
CXCR4-203ENST00000466288 CASTOR1Q8WTX7 329 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 ARL11Q969Q4 196 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 RITA1Q96K30 269 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 ETV7Q9Y603 341 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 VPS13DQ5THJ4 4388 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 C12orf77C9JDV5 145 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 AIPO00170 330 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 HPGDSO60760 199 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 HSPB1P04792 205 aaKnown RBP11.06□□□□□ -0.64
CXCR4-203ENST00000466288 CNTFRP26992 372 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 ZNF134P52741 427 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 PIGYQ3MUY2 71 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 PYDC2Q56P42 97 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 PYHIN1Q6K0P9 492 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 ZNF439Q8NDP4 499 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 OR14A2Q96R54 314 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 DPCDQ9BVM2 203 aaPredicted RBP11.06□□□□□ -0.64
CXCR4-203ENST00000466288 V9GY05 133 aa11.06□□□□□ -0.64
CXCR4-203ENST00000466288 IFITM5A6NNB3 132 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 FAM25AB3EWG3 89 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 FAM25CB3EWG5 89 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 FAM25GB3EWG6 89 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 CD2P06729 351 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 NDPQ00604 133 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 Q3ZCU0 254 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 ZNF554Q86TJ5 538 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 NR2C2APQ86WQ0 139 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 SUMF2Q8NBJ7 301 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 PXT1Q8NFP0 134 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 CHAC2Q8WUX2 184 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 FLYWCH2Q96CP2 140 aaKnown RBP11.05□□□□□ -0.64
CXCR4-203ENST00000466288 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 THAP7Q9BT49 309 aaPredicted RBP11.05□□□□□ -0.64
CXCR4-203ENST00000466288 RSRP1Q9BUV0 290 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 ELOVL1Q9BW60 279 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 HIPK2Q9H2X6 1198 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 FBXO7Q9Y3I1 522 aa11.05□□□□□ -0.64
CXCR4-203ENST00000466288 A0A1W2PN81 502 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 TMEM30CPA0ZSE6 113 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 CTDSPLO15194 276 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 SULT1B1O43704 296 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 CHRNA7P36544 502 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 ACTBP60709 375 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 IL18Q14116 193 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 CT45A1Q5HYN5 189 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 TRIQKQ629K1 86 aa11.04□□□□□ -0.64
CXCR4-203ENST00000466288 MZT2BQ6NZ67 158 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms