RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 KCNIP2Q9NS61 270 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 IL17BQ9UHF5 180 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 EYSQ5T1H1 3165 aa16.67■□□□□ 0.26
SDF4-205ENST00000465727 C1QTNF9BB2RNN3 333 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 C2CD4DB7Z1M9 353 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 CXCL13O43927 109 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 CDC34P49427 236 aaPredicted RBP16.66■□□□□ 0.26
SDF4-205ENST00000465727 TMEM183BQ1AE95 376 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 CYB5R2Q6BCY4 276 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 NUFIP2Q7Z417 695 aaKnown RBP16.66■□□□□ 0.26
SDF4-205ENST00000465727 CEP192Q8TEP8 1941 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 TRAV9-1A0A075B6T8 112 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 OR5B21A6NL26 309 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 PMS2P5A8MQ11 134 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 MPLP40238 635 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 RAB1CQ92928 201 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 TMEM45BQ96B21 275 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 SDSLQ96GA7 329 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 CIB3Q96Q77 187 aaPredicted RBP16.66■□□□□ 0.26
SDF4-205ENST00000465727 PARD6AQ9NPB6 346 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 CRIM1Q9NZV1 1036 aa16.66■□□□□ 0.26
SDF4-205ENST00000465727 SS18L1O75177 396 aaPredicted RBP16.65■□□□□ 0.26
SDF4-205ENST00000465727 WNT5AP41221 380 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 CST9LP1Q5W188 147 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 TOMM20LQ6UXN7 152 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 SMRP1Q8NCR6 262 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 OR5T1Q8NG75 326 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 SFRP2Q96HF1 295 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 OR51B6Q9H340 312 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 WDR1O75083 606 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 EPHA8P29322 1005 aaPredicted RBP16.65■□□□□ 0.26
SDF4-205ENST00000465727 TNFSF10P50591 281 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 TPTE2P1Q5T6R2 138 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 DRAM1Q8N682 238 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 ZBTB34Q8NCN2 500 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 OR10D3Q8NH80 312 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 SGMS2Q8NHU3 365 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 GMPPAQ96IJ6 420 aaPredicted RBP16.65■□□□□ 0.26
SDF4-205ENST00000465727 PKIBQ9C010 78 aa16.65■□□□□ 0.26
SDF4-205ENST00000465727 RYDENQ9NUL5 291 aaKnown RBP16.65■□□□□ 0.26
SDF4-205ENST00000465727 MRPS18CQ9Y3D5 142 aaKnown RBP16.65■□□□□ 0.26
SDF4-205ENST00000465727 LAMA1P25391 3075 aa16.64■□□□□ 0.26
SDF4-205ENST00000465727 IGHV5-10-1A0A0J9YXX1 117 aa16.64■□□□□ 0.25
SDF4-205ENST00000465727 IFNL4K9M1U5 179 aa16.64■□□□□ 0.25
SDF4-205ENST00000465727 NUPR1O60356 82 aa16.64■□□□□ 0.25
SDF4-205ENST00000465727 KRASP01116 189 aa16.64■□□□□ 0.25
SDF4-205ENST00000465727 COX6A1P12074 109 aa16.64■□□□□ 0.25
SDF4-205ENST00000465727 ADMP35318 185 aa16.64■□□□□ 0.25
SDF4-205ENST00000465727 GNB1P62873 340 aa16.64■□□□□ 0.25
SDF4-205ENST00000465727 PMP22Q01453 160 aa16.64■□□□□ 0.25
SDF4-205ENST00000465727 ZNF552Q9H707 407 aaPredicted RBP16.64■□□□□ 0.25
SDF4-205ENST00000465727 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.64■□□□□ 0.25
SDF4-205ENST00000465727 MPC1Q9Y5U8 109 aa16.64■□□□□ 0.25
SDF4-205ENST00000465727 MDFIC2A0A1B0GVS7 189 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 LRRC30A6NM36 301 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 P0C879 139 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 IRF2P14316 349 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 CCNOP22674 350 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 BRS3P32247 399 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 LTBRP36941 435 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 GNG3P63215 75 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 TFF3Q07654 80 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 YRDCQ86U90 279 aaKnown RBP16.63■□□□□ 0.25
SDF4-205ENST00000465727 RPS19BP1Q86WX3 136 aaKnown RBP16.63■□□□□ 0.25
SDF4-205ENST00000465727 SGCZQ96LD1 299 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 ZNF407Q9C0G0 2248 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 C5orf49A4QMS7 147 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 ZNF497Q6ZNH5 498 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 HLA-CQ95604 372 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 LINC00470Q9BZP3 86 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 ZDHHC11Q9H8X9 412 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 CABIN1Q9Y6J0 2220 aa16.63■□□□□ 0.25
SDF4-205ENST00000465727 NPSP0C0P6 89 aa16.62■□□□□ 0.25
SDF4-205ENST00000465727 MLF1P58340 268 aa16.62■□□□□ 0.25
SDF4-205ENST00000465727 Q6ZWC4 215 aa16.62■□□□□ 0.25
SDF4-205ENST00000465727 MAFAQ8NHW3 353 aaPredicted RBP16.62■□□□□ 0.25
SDF4-205ENST00000465727 AKIRIN1Q9H9L7 192 aaPredicted RBP16.62■□□□□ 0.25
SDF4-205ENST00000465727 LPAR2Q9HBW0 351 aa16.62■□□□□ 0.25
SDF4-205ENST00000465727 PLA2G3Q9NZ20 509 aa16.62■□□□□ 0.25
SDF4-205ENST00000465727 TRAPPC2LQ9UL33 140 aa16.62■□□□□ 0.25
SDF4-205ENST00000465727 A0A1B0GUS0 222 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 ANKRD30BLA7E2S9 258 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 Q6P435 159 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 DTD1Q8TEA8 209 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 CCDC74BQ96LY2 380 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 ZNF488Q96MN9 340 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 VAMP8Q9BV40 100 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 A0A1W2PQM1 296 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 NDUFB4O95168 129 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 UMODP07911 640 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 C1QTNF9P0C862 333 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 KITLGP21583 273 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 OR1L1Q8NH94 360 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 PRDM6Q9NQX0 595 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 MBNL3Q9NUK0 354 aaKnown RBP16.61■□□□□ 0.25
SDF4-205ENST00000465727 CLN8Q9UBY8 286 aa16.61■□□□□ 0.25
SDF4-205ENST00000465727 ODAMA1E959 279 aa16.6■□□□□ 0.25
SDF4-205ENST00000465727 P04436 131 aa16.6■□□□□ 0.25
SDF4-205ENST00000465727 PRR18Q8N4B5 295 aa16.6■□□□□ 0.25
SDF4-205ENST00000465727 ZNF645Q8N7E2 425 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms