RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 COX5AP20674 150 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 NCMAPQ5T1S8 102 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 C1orf162Q8NEQ5 155 aaPredicted RBP15.35■□□□□ 0.05
SYNE4-204ENST00000465425 PRR7Q8TB68 274 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 LHX4Q969G2 390 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 C5orf30Q96GV9 206 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 NIT2Q9NQR4 276 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 CLN8Q9UBY8 286 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 TIMM9Q9Y5J7 89 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 CYB5BO43169 146 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 PTBP3O95758 552 aaKnown RBP15.35■□□□□ 0.05
SYNE4-204ENST00000465425 TFF1P04155 84 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 CECR9P0C854 216 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 SSTR5P35346 364 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 COL10A1Q03692 680 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 ZNF718Q3SXZ3 478 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 Q6ZR03 302 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 H2BFWTQ7Z2G1 175 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 TPRX1Q8N7U7 411 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 WDR31Q8NA23 367 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 C9orf106Q8NAJ2 232 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 CA5BP1Q8WTZ4 195 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 LAMP3Q9UQV4 416 aa15.35■□□□□ 0.05
SYNE4-204ENST00000465425 TGIF2-C20orf24A0A0A6YYL0 155 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 C17orf98A8MV24 154 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 TUBG1P23258 451 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 CTAG1AP78358 180 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 EIF4EBP1Q13541 118 aaPredicted RBP15.34■□□□□ 0.05
SYNE4-204ENST00000465425 ATP6V1FQ16864 119 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 TCTEX1D1Q8N7M0 179 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 OR10P1Q8NGE3 313 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 DTD1Q8TEA8 209 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 SARAFQ96BY9 339 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 TUBG2Q9NRH3 451 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 PCNX2A6NKB5 2137 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 GTF3C1Q12789 2109 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 OR5H1A6NKK0 313 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 IFNL4K9M1U5 179 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 AQP7O14520 342 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 ZNF737O75373 536 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 CLN5O75503 358 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 CLDN14O95500 239 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 P0C879 139 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 KITLGP21583 273 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 B2MP61769 119 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 ZNF610Q8N9Z0 462 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 CIB3Q96Q77 187 aaPredicted RBP15.34■□□□□ 0.05
SYNE4-204ENST00000465425 TAAR6Q96RI8 345 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 TMEM147Q9BVK8 224 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 TOLLIPQ9H0E2 274 aa15.34■□□□□ 0.05
SYNE4-204ENST00000465425 IGHV3-43A0A0B4J1X8 118 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 WISP2O76076 250 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 CD55P08174 381 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 IGHV3-43DP0DP04 118 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 BEND4Q6ZU67 534 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 RPP25LQ8N5L8 163 aaKnown RBP15.33■□□□□ 0.05
SYNE4-204ENST00000465425 OR13A1Q8NGR1 328 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 RFESDQ8TAC1 157 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 LURAP1Q96LR2 239 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 TMPRSS5Q9H3S3 457 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 WASF3Q9UPY6 502 aa15.33■□□□□ 0.05
SYNE4-204ENST00000465425 LOC400499M0QZD8 3231 aa15.33■□□□□ 0.04
SYNE4-204ENST00000465425 TRAV17A0A0B4J275 112 aa15.33■□□□□ 0.04
SYNE4-204ENST00000465425 SPINT2O43291 252 aa15.33■□□□□ 0.04
SYNE4-204ENST00000465425 ZG16O60844 167 aa15.33■□□□□ 0.04
SYNE4-204ENST00000465425 CYB5R3P00387 301 aaPredicted RBP15.33■□□□□ 0.04
SYNE4-204ENST00000465425 SRSF6Q13247 344 aaKnown RBP15.33■□□□□ 0.04
SYNE4-204ENST00000465425 METRNQ9UJH8 293 aa15.33■□□□□ 0.04
SYNE4-204ENST00000465425 DIDO1Q9BTC0 2240 aaKnown RBP15.32■□□□□ 0.04
SYNE4-204ENST00000465425 ZNF891A8MT65 544 aaPredicted RBP15.32■□□□□ 0.04
SYNE4-204ENST00000465425 DEFB108AA8MXU0 73 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 PRR33A8MZF0 331 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 CLDN34H7C241 214 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 RAB29O14966 203 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 Q3ZCU0 254 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 ZNF66Q6ZN08 573 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 C1orf87Q8N0U7 546 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 ZDHHC16Q969W1 377 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 HSD17B10Q99714 261 aaKnown RBP15.32■□□□□ 0.04
SYNE4-204ENST00000465425 SDF2L1Q9HCN8 221 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 TMEM242Q9NWH2 141 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 PSG11Q9UQ72 335 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 MBP02144 154 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 FGF7P21781 194 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 NDUFA6P56556 154 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 BRWD1-AS2P59051 145 aa15.32■□□□□ 0.04
SYNE4-204ENST00000465425 CACNA1DQ01668 2161 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 ST8SIA5O15466 376 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 YIF1AO95070 293 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 IGKV1D-33P01593 117 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 IGKV1-33P01594 117 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 FABP1P07148 127 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 MZT1Q08AG7 82 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 FOXF2Q12947 444 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 EDDM3AQ14507 147 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 CENPVQ7Z7K6 275 aaPredicted RBP15.31■□□□□ 0.04
SYNE4-204ENST00000465425 ZNF709Q8N972 641 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 LRRC29Q8WV35 223 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 SLC25A22Q9H936 323 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 MARCH11A6NNE9 402 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms