RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ZNF705FA8MVS1 300 aaPredicted RBP10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 KLF7O75840 302 aaPredicted RBP10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 C1QTNF9P0C862 333 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 ZNF705DP0CH99 300 aaPredicted RBP10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 ZNF705BP0CI00 300 aaPredicted RBP10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 CCL4P13236 92 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 G6PCP35575 357 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 MPLP40238 635 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 SRSF7Q16629 238 aaKnown RBP eCLIP10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 SPATA46Q5T0L3 261 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 ZNF705AQ6ZN79 300 aaPredicted RBP10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 LSM10Q969L4 123 aaKnown RBP10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 SDSLQ96GA7 329 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 TMEM9BQ9NQ34 198 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 SLC25A6P12236 298 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 ZNF816Q0VGE8 651 aaPredicted RBP10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 IQCJQ1A5X6 159 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 TECTBQ96PL2 329 aa10.63□□□□□ -0.71
CLCNKA-204ENST00000464764 PINLYPA6NC86 204 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 GGCTO75223 188 aaKnown RBP10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 PDGFBP01127 241 aaPredicted RBP10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 SELEP16581 610 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 ERVFC1-1P60608 527 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 FAM58AQ8N1B3 248 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 DRAM1Q8N682 238 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 DEPPQ9NTK1 212 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 TRAPPC1Q9Y5R8 145 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 GJE1A6NN92 205 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 TMEM250H0YL14 139 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 DEGS1O15121 323 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 TOX3O15405 576 aaPredicted RBP10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 HOXA6P31267 233 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 ATP5G3P48201 142 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 TMEM14EPQ6UXP3 125 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 ZNF808Q8N4W9 903 aaPredicted RBP10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 KIAA1549Q9HCM3 1950 aa10.62□□□□□ -0.71
CLCNKA-204ENST00000464764 LOC102723996A0A087X1L8 192 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 CTXND1A0A1B0GTU2 59 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 C11orf94C9JXX5 98 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 M0R143 59 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 ZG16O60844 167 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 CA6P23280 308 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 TDGF1P3P51864 188 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 OR5A2Q8NGI9 324 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 UBE2ZQ9H832 354 aaPredicted RBP10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 TRAPPC2LQ9UL33 140 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 DOCK10Q96BY6 2186 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 TRAV38-1A0A0B4J264 116 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 NDUFB4O95168 129 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 MS4A10Q96PG2 267 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 TBX15Q96SF7 602 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 IMMP2LQ96T52 175 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 NAGKQ9UJ70 344 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 MRPL33O75394 65 aaKnown RBP10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 RPL15P61313 204 aaKnown RBP10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 GNB1P62873 340 aa10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 RPL30P62888 115 aaKnown RBP10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 NEIL1Q96FI4 390 aaPredicted RBP10.61□□□□□ -0.71
CLCNKA-204ENST00000464764 P04436 131 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 NPSP0C0P6 89 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 SRD5A2P31213 254 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 CEBPDP49716 269 aaPredicted RBP10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 ACOT6Q3I5F7 207 aaPredicted RBP10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 ACSF3Q4G176 576 aaPredicted RBP10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 C1orf194Q5T5A4 169 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 RIPPLY2Q5TAB7 128 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 LINC01551Q86U37 167 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 TUSC5Q8IXB3 177 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 CISD2Q8N5K1 135 aaKnown RBP10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 AGBL5Q8NDL9 886 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 ANAPC16Q96DE5 110 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 MSL2Q9HCI7 577 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 MANBALQ9NQG1 85 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 RBFOX2O43251 390 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 FRMD6-AS1P0C7T7 363 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 RAB4BP61018 213 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 SAXO1Q8IYX7 474 aa10.6□□□□□ -0.71
CLCNKA-204ENST00000464764 A0A1B0GWJ7 208 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 TFF1P04155 84 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 SRFP11831 508 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 RAB4AP20338 218 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 GDF1P27539 372 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 CCKARP32238 428 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 THBS3P49746 956 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 SGMS2Q8NHU3 365 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 C5orf30Q96GV9 206 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 NPCDR1Q9BY65 106 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 RIMS4Q9H426 269 aaPredicted RBP10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 RBMXL2O75526 392 aaKnown RBP10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 HPRT1P00492 218 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 CELA3AP09093 270 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 IRF2P14316 349 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 Q0VFX4 171 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 Q6P435 159 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 ODAMA1E959 279 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 PMS2P5A8MQ11 134 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 MBP02144 154 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 ADMP35318 185 aa10.59□□□□□ -0.71
CLCNKA-204ENST00000464764 SRP14P37108 136 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms