RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 SH3BGRL2Q9UJC5 107 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 ARL2-SNX15V9GYD0 113 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 LILRA5A6NI73 299 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 C1QTNF9BB2RNN3 333 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 NAPSAO96009 420 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 C1QTNF9P0C862 333 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 OTX1P32242 354 aaPredicted RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 CDKN1AP38936 164 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 PPP1CAP62136 330 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 UBE2G1P62253 170 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TLE1Q04724 770 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 RTL8BQ17RB0 113 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 MAJINQ3KP22 176 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TDRG1Q3Y452 100 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 SLC25A53Q5H9E4 307 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM14EPQ6UXP3 125 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 PLXDC1Q8IUK5 500 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 SFTPA1Q8IWL2 248 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 PLPPR1Q8TBJ4 325 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 THAP3Q8WTV1 239 aaPredicted RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TRIB1Q96RU8 372 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 NPCDR1Q9BY65 106 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 DEFB126Q9BYW3 111 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 SAP30LQ9HAJ7 183 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 GNB4Q9HAV0 340 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM167BQ9NRX6 74 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 CLEC1BQ9P126 229 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 FBXL7Q9UJT9 491 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TRAPPC2LQ9UL33 140 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 FANCMQ8IYD8 2048 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 IGKV3D-11A0A0A0MRZ8 115 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 A0A1B0GV72 72 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 A6NDN8 102 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 HELTA6NFD8 242 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 OTOL1A6NHN0 477 aaPredicted RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF891A8MT65 544 aaPredicted RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 C9JCJ5 164 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 J3QR06 171 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 NUPR1O60356 82 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 GDF9O60383 454 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 APOA2P02652 100 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 AMY1AP04745 511 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 WNT2P09544 360 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 C3orf79P0CE67 100 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 MNX1P50219 401 aaPredicted RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 LHX2P50458 406 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 GNB1P62873 340 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 HYAL1Q12794 435 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 PDCD1Q15116 288 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 GAB4Q2WGN9 574 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 Q56UQ5 140 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 FAM69BQ5VUD6 431 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 FAM71F2Q6NXP2 309 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 MRPL54Q6P161 138 aaKnown RBP3.3□□□□□ -1.88
CCNL1-204ENST00000464316 ACSM6Q6P461 480 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 OR8I2Q8N0Y5 310 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 FGFRL1Q8N441 504 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 SVIPQ8NHG7 77 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 LMX1AQ8TE12 382 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 TNFRSF14Q92956 283 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 SPSB4Q96A44 273 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF524Q96C55 264 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 KLHDC3Q9BQ90 382 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 WNT10AQ9GZT5 417 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 ENY2Q9NPA8 101 aa3.3□□□□□ -1.88
CCNL1-204ENST00000464316 A0A1B0GX78 115 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 GAGE12BA1L429 117 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 ANKRD30BLA7E2S9 258 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CD5LO43866 347 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 NUDT3O95989 172 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CD38P28907 300 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CD1BP29016 333 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 SRIP30626 198 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 LGALS4P56470 323 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 EDDM3BP56851 147 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 TAS2R45P59539 299 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 RAB30Q15771 203 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 PRSS8Q16651 343 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF542PQ5EBM4 170 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 VWA1Q6PCB0 445 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 RASL11AQ6T310 242 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 VASH2Q86V25 355 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 MTURNQ8N3F0 131 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 OR13H1Q8NG92 308 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 OR5A2Q8NGI9 324 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 OCC1Q8TAD7 63 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 DEFB118Q96PH6 123 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 OR2V2Q96R30 315 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 TAAR6Q96RI8 345 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM70Q9BUB7 260 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 GCM1Q9NP62 436 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 OSTCQ9NRP0 149 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 SPAG17Q6Q759 2223 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CACNA1IQ9P0X4 2223 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 IGKV1D-13A0A0B4J2D9 117 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 IGLC7A0M8Q6 106 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 NDUFB8O95169 186 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 IGKV1-13P0DP09 117 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 USF1P22415 310 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-204ENST00000464316 ERVK-16P61578 105 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms