RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 GPR12P47775 334 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 DIAPH2-AS1Q14236 149 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 MIDNQ504T8 468 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 RPL39P5Q59GN2 51 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 MINOS1Q5TGZ0 78 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 FAM71F2Q6NXP2 309 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 PLET1Q6UQ28 207 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 LHFPL4Q7Z7J7 247 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 LYG1Q8N1E2 194 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 CREB3L1Q96BA8 519 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 SLC2A9Q9NRM0 540 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 DPM3Q9P2X0 92 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 MINOS1-NBL1R4GNA1 71 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 HIVEP1P15822 2718 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 TRAV6A0A075B6T7 132 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 NPFFO15130 113 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 HTR1DP28221 377 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 DUTP33316 252 aaKnown RBP11.61□□□□□ -0.55
COL6A1-202ENST00000463060 PIGPP57054 158 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 BRWD1-AS2P59051 145 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 RPL30P62888 115 aaKnown RBP11.61□□□□□ -0.55
COL6A1-202ENST00000463060 SUPT4H1P63272 117 aaKnown RBP11.61□□□□□ -0.55
COL6A1-202ENST00000463060 TRIM16LQ309B1 348 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 PDZD9Q8IXQ8 264 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 OR10X1Q8NGY0 326 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 GPHA2Q96T91 129 aa11.61□□□□□ -0.55
COL6A1-202ENST00000463060 TBL2Q9Y4P3 447 aaKnown RBP11.61□□□□□ -0.55
COL6A1-202ENST00000463060 AMMECR1Q9Y4X0 333 aaPredicted RBP11.61□□□□□ -0.55
COL6A1-202ENST00000463060 TRAV40A0A0B4J280 105 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 A0A1W2PRD5 423 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 A0A1W2PRF3 423 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 A0A1W2PRM7 423 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 CRYM-AS1A6NIL9 109 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 LINC00473A8K010 186 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 LEUTXA8MZ59 168 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 INMT-MINDY4F8WBC2 141 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 MPPED1O15442 326 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 PEX14O75381 377 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 RLN1P04808 185 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 IL5P05113 134 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 CT45A6P0DMU7 189 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 CT45A5P0DMU8 189 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 CT45A7P0DMV0 189 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 ANXA7P20073 488 aaKnown RBP11.6□□□□□ -0.55
COL6A1-202ENST00000463060 LINC00205P59089 165 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 BPIFB3P59826 476 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 UBE2MP61081 183 aaKnown RBP11.6□□□□□ -0.55
COL6A1-202ENST00000463060 ZNF816Q0VGE8 651 aaPredicted RBP11.6□□□□□ -0.55
COL6A1-202ENST00000463060 PHLDA2Q53GA4 152 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 TPTE2P1Q5T6R2 138 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 ZNF66Q6ZN08 573 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 KCTD9Q7L273 389 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 CMTM1Q8IZ96 169 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 DYNAPQ8N1N2 210 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 C17orf50Q8WW18 174 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 RTN4IP1Q8WWV3 396 aaPredicted RBP11.6□□□□□ -0.55
COL6A1-202ENST00000463060 DDB2Q92466 427 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 S1PR3Q99500 378 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 KCNS2Q9ULS6 477 aa11.6□□□□□ -0.55
COL6A1-202ENST00000463060 C14orf166Q9Y224 244 aaKnown RBP11.6□□□□□ -0.55
COL6A1-202ENST00000463060 ANK3Q12955 4377 aaKnown RBP11.6□□□□□ -0.55
COL6A1-202ENST00000463060 TLN2Q9Y4G6 2542 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 A0A0B4J293 547 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 M0R1X1 148 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 GAPDHP04406 335 aaKnown RBP11.59□□□□□ -0.55
COL6A1-202ENST00000463060 CD99P14209 185 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 F2RP25116 425 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 IL3RAP26951 378 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 SAA4P35542 130 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 HABP2Q14520 560 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-202ENST00000463060 TUSC1Q2TAM9 212 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 TMEM128Q5BJH2 165 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 GPR157Q5UAW9 335 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 RUSC1-AS1Q66K80 236 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 Q6ZNX1 250 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 TMED4Q7Z7H5 227 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 TBC1D26Q86UD7 250 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 ZNF383Q8NA42 475 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 CAPSLQ8WWF8 208 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 MALSU1Q96EH3 234 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 GALNT14Q96FL9 552 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 HSD17B10Q99714 261 aaKnown RBP11.59□□□□□ -0.55
COL6A1-202ENST00000463060 SMR3AQ99954 134 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 NABP2Q9BQ15 211 aa11.59□□□□□ -0.55
COL6A1-202ENST00000463060 SVEP1Q4LDE5 3571 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 IGHV3OR16-10A0A075B7F0 116 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 A0A1W2PPI3 338 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 OOSP1A8MZH6 123 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 TNFSF12O43508 249 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 LY6G6DO95868 133 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 OR4E1P0C645 316 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 AKR1C4P17516 323 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 CEACAM3P40198 252 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 LGALS4P56470 323 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 RAB25P57735 213 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 TAS2R31P59538 309 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 PPP1R1AQ13522 171 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 ABCA11PQ4W5N1 156 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 C9orf139Q6ZV77 190 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 CCDC71LQ8N9Z2 235 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms