RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SSTR5P35346 364 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 RBM38Q9H0Z9 239 aaKnown RBP7.79□□□□□ -1.16
BRCA1-205ENST00000461221 DNAJC4Q9NNZ3 241 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 BEX4Q9NWD9 120 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-205ENST00000461221 A1L4Q6 167 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 SNRPD3P62318 126 aaKnown RBP7.79□□□□□ -1.16
BRCA1-205ENST00000461221 SRSF12Q8WXF0 261 aaKnown RBP7.79□□□□□ -1.16
BRCA1-205ENST00000461221 SPSB4Q96A44 273 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 CCL13Q99616 98 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 PIMREGQ9BSJ6 248 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 PLA2G2FQ9BZM2 168 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 RTN4RQ9BZR6 473 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 IDI2-AS1Q9NZ38 188 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 ZDHHC8Q9ULC8 765 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 MOSPD3O75425 235 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 RUNX1Q01196 453 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 C1QL3Q5VWW1 255 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 TCF23Q7RTU1 214 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 TAF15Q92804 592 aaKnown RBP eCLIP7.79□□□□□ -1.166e-6■□□□□ 11.2
BRCA1-205ENST00000461221 OR51M1Q9H341 326 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 ARID1BQ8NFD5 2236 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-205ENST00000461221 C4AP0C0L4 1744 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 DDTP30046 118 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 P2RY6Q15077 328 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 FAM209AQ5JX71 171 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 C10orf111Q8N326 155 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 OR4C13Q8NGP0 309 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 EEF1AKMT3Q96AZ1 226 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 ELF5Q9UKW6 265 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-205ENST00000461221 MAST2Q6P0Q8 1798 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 RBMY1BA6NDE4 496 aaKnown RBP7.78□□□□□ -1.16
BRCA1-205ENST00000461221 RBMY1EA6NEQ0 496 aaKnown RBP7.78□□□□□ -1.16
BRCA1-205ENST00000461221 CGB1A6NKQ9 187 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 TMEM250H0YL14 139 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 H3BRM9 83 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 PRSS23O95084 383 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 ADRA2AP08913 450 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 RBMY1DP0C7P1 496 aaKnown RBP7.78□□□□□ -1.16
BRCA1-205ENST00000461221 RBMY1A1P0DJD3 496 aaKnown RBP7.78□□□□□ -1.16
BRCA1-205ENST00000461221 RBMY1CP0DJD4 496 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 HKR1P10072 659 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 MDKP21741 143 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-205ENST00000461221 MPV17P39210 176 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 RND2P52198 227 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 NEUROG1Q92886 237 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 C2orf88Q9BSF0 95 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 FAM60AQ9NP50 221 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 ST6GALNAC2Q9UJ37 374 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 TMEM262E9PQX1 116 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 FGF5P12034 268 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 SRIP30626 198 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 IRF3Q14653 427 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 PSMG4Q5JS54 123 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 TMEM92Q6UXU6 159 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 UCN2Q96RP3 112 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 QTRT1Q9BXR0 403 aaKnown RBP7.78□□□□□ -1.16
BRCA1-205ENST00000461221 SOD3P08294 240 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 COL9A1P20849 921 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 UCP2P55851 309 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 ARF6P62330 175 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 FAM27BQ5VT28 67 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 DDA1Q9BW61 102 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 TTTY12Q9BZ98 90 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 R3HDMLQ9H3Y0 253 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 CCL27Q9Y4X3 112 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 IGKV3OR2-268A0A0C4DH90 116 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 C7orf66A4D0T2 115 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 PLA2G10O15496 165 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 AGAP20933 346 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 C9orf50Q5SZB4 431 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 HCP5Q6MZN7 132 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 FAM159AQ6UWV7 190 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 IGFBP6P24592 240 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-205ENST00000461221 DCAF10Q5QP82 559 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 SAPCD1Q5SSQ6 148 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 MIC13Q5XKP0 118 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 OR51G1Q8NGK1 321 aa7.78□□□□□ -1.16
BRCA1-205ENST00000461221 MRPL16Q9NX20 251 aaKnown RBP7.78□□□□□ -1.16
BRCA1-205ENST00000461221 CELA2BP08218 269 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-205ENST00000461221 HOXB3P14651 431 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-205ENST00000461221 ZCCHC14Q8WYQ9 949 aaKnown RBP7.77□□□□□ -1.17
BRCA1-205ENST00000461221 NEU1Q99519 415 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 MRPS18AQ9NVS2 196 aaKnown RBP7.77□□□□□ -1.17
BRCA1-205ENST00000461221 ATP5IP56385 69 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-205ENST00000461221 MBNL2Q5VZF2 373 aaKnown RBP7.77□□□□□ -1.17
BRCA1-205ENST00000461221 TRBV20OR9-2A0A075B6H5 130 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 OR2H2O95918 312 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 LIPFP07098 398 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 NPPCP23582 126 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 CA7P43166 264 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 EFNB2P52799 333 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 HSPE1P61604 102 aaKnown RBP7.77□□□□□ -1.17
BRCA1-205ENST00000461221 SLC25A53Q5H9E4 307 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 DNM1P46Q6ZS02 220 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 TTC9CQ8N5M4 171 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 SMOC1Q9H4F8 434 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 PLSCR2Q9NRY7 297 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 URB1O60287 2271 aaKnown RBP7.77□□□□□ -1.17
BRCA1-205ENST00000461221 SCN11AQ9UI33 1791 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 PLAUP00749 431 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms